Organism Information | ||
---|---|---|
Organism name | Chloroflexus aurantiacus J-10-fl | |
External links | NCBI/RefSeq:NC_010175 | |
Lineage | Bacteria; Chloroflexi; Chloroflexi; Chloroflexales; Chloroflexaceae; Chloroflexus; aurantiacus | |
Sequencing status | Finished | |
Sequencing center | DOE Joint Genome Institute | |
Oxygen requirement | Anaerobes | |
Isolation | Hakone hot spring area in Japan | |
Habitat | Fresh water, hot spring | |
Motility | Mobile | |
Temperature range (temperature optimum) | Thermophile (52-60°C) | |
Cell shape | Filament-shaped | |
Cell arrangement | filaments | |
Gram staining | Gram-negative | |
Phenotype | Green non-sulfur | |
Energy source | Light (phototrophic growth) and organic carbon sources (chemotrophic growth) | |
carbon assimilation | Photoautotrophy, photoheterotrophy, and chemoheterotrophy | |
Genome Statistics | ||
 | Number | Percentage of total genes or base pairs |
DNA, total number of bases | 5258541 | 100.00% |
DNA G + C number of bases | 2981443 | 56.70% |
Total number of genes | 3914 | 100.00% |
Protein coding genes | 3853 | 98.44% |
- with function prediction | 2845 | 72.69% |
- without function prediction with similarity | 1004 | 25.65% |
- without function prediction without similarity | 4 | 0.10% |
Genes coding enzymes | 934 | 23.86% |
Genes coding fusion proteins | 331 | 8.46% |
Genes coding signal peptides | 653 | 16.68% |
Genes coding transmembrane proteins | 789 | 20.16% |
Pseudo genes | 0 | 0.00% |
RNA genes | 61 | 1.56% |
rRNA genes | 9 | 0.23% |
tRNA genes | 49 | 1.25% |