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Table 4 Summary of SNPs detected in A. auriculiformis and A. mangium.

From: Identification of lignin genes and regulatory sequences involved in secondary cell wall formation in Acacia auriculiformis and Acacia mangium via de novo transcriptome sequencing

  A. auriculiformis A. mangium
Number of contigs at least 200 bp 23,850 20,387
Total size of contigs at least 200 bp (bp) 18,701,412 15,903,039
Putative SNPs 30,837 19,070
Filtered SNPs 16,648 9,335
Transition SNPs 10,826 6,064
Transversion SNPs 5,822 3,271
SNP frequency 1 every 1,123 bp 1 every 1,704 bp