Table 3 O157:H7-Specific Gene Targets
ProbeSet ID | Accession ID | Strain | Genome Position | Locus | Gene | Product | GI |
|---|---|---|---|---|---|---|---|
1766456_s_at | NC_002655.2 | Escherichia coli O157:H7 EDL933 | 2849958-2851076 | Z3198-RC | - | EDL933 | 16445223 |
1759686_s_at | NC_002655.2 | Escherichia coli O157:H7 EDL933 | 2848990-2849955 | Z3197 | fcI | fucose synthetase | 962092 |
1759686_s_at | NC_002695.1 | Escherichia coli O157:H7 Sakai | 2778776-2779741 | ECs2838 | - | fucose synthetase | 912293 |
1766456_s_at | NC_002695.1 | Escherichia coli O157:H7 Sakai | 2779744-2780862 | ECs2839 | - | GDP-D-mannose dehydratase | 912548 |
1766456_s_at | NC_002655.2 | Escherichia coli O157:H7 EDL933 | 2849958-2851076 | Z3198 | - | GDP-mannose dehydratase | 962093 |
1764806_s_at | NC_002655.2 | Escherichia coli O157:H7 EDL933 | 2848478-2848987 | Z3196 | wbdQ | GDP-mannose mannosylhydrolase | 962091 |
1762793_s_at | NC_002695.1 | Escherichia coli O157:H7 Sakai | 2780369-2780601 | ECs5479 | - | hypothetical protein | 2693774 |
1759443_s_at | NC_002695.1 | Escherichia coli O157:H7 Sakai | 2776834-2778282 | ECs2836 | - | mannose-1-P guanosyltransferase | 912820 |
1759443_s_at | NC_002655.2 | Escherichia coli O157:H7 EDL933 | 2847048-2848496 | Z3195 | manC | mannose-1-P guanosyltransferase | 962090 |
1762953_s_at | NC_002695.1 | Escherichia coli O157:H7 Sakai | 2783218-2784603 | ECs2842 | - | O antigen flippase | 912601 |
1762953_s_at | NC_002655.2 | Escherichia coli O157:H7 EDL933 | 2853432-2854823 | Z3201 | wzx | O antigen flippase Wzx | 962096 |
1766849_s_at | NC_002655.2 | Escherichia coli O157:H7 EDL933 | 2855525-2856709 | Z3203 | wzy | O antigen polymerase | 962098 |
1766849_s_at | NC_002695.1 | Escherichia coli O157:H7 Sakai | 2785311-2786495 | ECs2844 | - | O antigen polymerase | 912486 |
1764806_s_at | NC_002695.1 | Escherichia coli O157:H7 Sakai | 2778264-2778773 | ECs2837 | - | putative GDP-L-fucose pathway enzyme | 912421 |