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Table 2 Summary of candidate SNP containing assemblies and their location on the MT3.5 chromosomes

From: Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis

 

Singleton

TC

TC with SNPs

Number of SNPs

Total

30072

24144

7342

40661

Mapped to Mt. 3.5

9156

10911

3491

20270

   Chr1

995

1274

388

2236

   Chr2

1102

1224

404

2497

   Chr3

1208

1548

476

2551

   Chr4

1393

1775

591

3592

   Chr5

1522

1820

577

3162

   Chr6

428

343

122

867

   Chr7

1113

1411

430

2310

   Chr8

1018

1089

372

2319

   Chr0

377

427

131

736