Skip to main content

Table 1 Number of identified peptides and proteins by algorithms with a FDR < 2%

From: Identification of alternative splice variants in Aspergillus flavus through comparison of multiple tandem MS search algorithms

Algorithm Threshold Number of
Identified
Peptides
MS/MS
FDR (%)
Number of
Identified
RefSeq Proteins
Number of
Identified
Splice Variants
Mascot E-value < 0.001 2731 1.88 747 21
OMSSA E-value < 0.09 2407 1.89 745 20
X! Tandem E-value < 0.04 2682 1.76 831 36
InsPecT p-value < 0.02 2563 1.91 738 33