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Table 4 The genome significant QTLs (from LDLA) for skatole

From: Large scale genome-wide association and LDLA mapping study identifies QTLs for boar taint and related sex steroids

SSC

QTL

Breed

LnLikratio

CWS_P**

GWS_P**

Mb_Conf.Int.$

1

1as

L*/D

5.56/13.0

0.0003

0.005

165.5 - 170.1

5

5s

L*

11.45

0.0007

0.013

63.2 - 68.4

6

6as

L*

36.30

< 0.0001

< 0.001

3.7-5.0

6

6bs

L*

16.50

< 0.0001

< 0.001

32.2 - 39.4

7

7as

L/D*

27.98/10.25

< 0.0001

< 0.001

61.5 - 69.6

7

7bs

L/D*

24.29/10.25

< 0.0001

< 0.001

75.9-81.6

10

10as

L*

10.83

0.0011

0.018

11.3 - 13.6

10

10bs

L*

14.52

0.0001

0.002

53.1-55.3

11

11s

L

9.88

0.0017

0.030

15.7 - 16.7

13

13s

D*

10.81

0.0010

0.018

60.5 - 65.6

14

14as

L*

10.34

0.0017

0.031

38.1 - 39.1

14

14bs

L*/D*

9.76/8.27

0.0024

0.042

146.4 - 148.4

  1. * Additionally at least Chromosome Wide Significant for indole
  2. ** The highest P-value from the two breeds
  3. s All QTLs for skatole are marked with s.
  4. $ The boundaries of the 90%-confidence-interval in mega-bases (Mb).