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Table 1 Number of polymorphisms detected and selected in the different sequencing sets.

From: Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

   Number of polymorphisms (number of fragments or contigs represented)
  Number of fragments or contigs available for detection Detected Functionality
score ≥ 0.4
Selected for the assay
Validated SNPsa - - - 229 (132)
in vitro polymorphisms, set 1 49 572 (49) 352 (48) 37 (19)
in vitro polymorphisms, set 2 392 1,678 (375) 1,015 (367) 560 (325)
in silico polymorphisms, set 3 1,532 4,376 (587) 1,431 (518) 710 (424)
TOTAL 1,967 6,626 (1005) 2,798 (927) 1,536 (885)
  1. a From Lepoittevin et al. (2010) including 110 SNPs detected in 35 fragments from in vitro polymorphisms, set 1.