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Table 2 Comparison of primer sequences between OsBRI1 and its switchgrass homologsa

From: New genomic resources for switchgrass: a BAC library and comparative analysis of homoeologous genomic regions harboring bioenergy traits

Primer S1 S2 S3
Rice TGGAGACC ATTGGCAAGATC GCG ATT TTCAAA TGCTCCA G TCCAA GCAC GCACAG GCG
BAC 48E09 (D10) b TGGAGACT ATTGGCAAGATC GCA ACC TTCAAG TGCTCCA G TCCAA GCAA GCACAA GCA
BAC 65J23 (E2) b TGGAGACC ATTGGCAAGATC GCA ACC TTCAGG TGCTCCA G TCCAG GCAA GCACAA GCA
  1. aPrimers were designed based on sequence of the hypothetically conserved region of the rice OsBRI1 gene
  2. bThe corresponding sequences of the switchgrass homologs of the OsBRI1 gene in two homoeologous BACs are also listed. The different nucleotides are underlined.