New genomic resources for switchgrass: a BAC library and comparative analysis of homoeologous genomic regions harboring bioenergy traits

Table 2 Comparison of primer sequences between OsBRI1 and its switchgrass homologs^a

Primer	S1	S2	S3
Rice	TGGAGACC ATTGGCAAGATC	GCG ATT TTCAAA TGCTCCA G	TCCAA GCAC GCACAG GCG
BAC 48E09 (D10) ^b	TGGAGACT ATTGGCAAGATC	GCA ACC TTCAAG TGCTCCA G	TCCAA GCAA GCACAA GCA
BAC 65J23 (E2) ^b	TGGAGACC ATTGGCAAGATC	GCA ACC TTCAGG TGCTCCA G	TCCAG GCAA GCACAA GCA

^aPrimers were designed based on sequence of the hypothetically conserved region of the rice OsBRI1 gene
^bThe corresponding sequences of the switchgrass homologs of the OsBRI1 gene in two homoeologous BACs are also listed. The different nucleotides are underlined.

ISSN: 1471-2164