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Table 1 SiESTa sequence content

From: Comparative high-throughput transcriptome sequencing and development of SiESTa, the Silene EST annotation database

 

Library

 

SlM

SlF

SlFf

SdM

SdF

SmM

SvH

Ds

supSL

supSD

# ESTs

119

136

110

113

115

127

123

198

347

228

Nucleotides (Mbp)

28

32

25

27

27

29

29

46

85

54

# Unigenes

61

40

49

71

69

51

32

30

129

129

% Contigs

17

34

17

15

17

28

36

43

24

18

% ESTs in contigs

57

81

63

47

50

71

83

91

72

54

Avg. EST length (bp)

235

232

225

235

233

230

234

232

230

233

Avg. contig length (bp)

403

430

413

395

385

392

401

463

422

396

  1. (#) Units in thousands of sequences.
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BMC Genomics

ISSN: 1471-2164

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