Skip to main content

Table 5 Pseudomolecule Scaffolds Anchored & Ordered by MTP

From: Sequencing of a QTL-rich region of the Theobroma cacao genome using pooled BACs and the identification of trait specific candidate genes

Assembly Mix

Scaffold

Length

Anchored1

35L-20PP

scf7180000011012

917,434

YES

35L-20PP

scf7180000011011

891,242

YES

35L-20PP

scf7180000011013

793,788

YES

35L-20PP

2scf7180000011009

116,402

YES

35L-20PP

3scf7180000011010

103,901

YES

35L-20PP

scf7180000011001

91,517

NO

35L-20PP

scf7180000011002

5,131

NO

35L-20PP

scf7180000011003

2,355

NO

35L-20PP

scf7180000011004

1,060

NO

35L-20PP

scf7180000011008

507

NO

35L-20PP

scf7180000010999

500

NO

35L-20PP

scf7180000011005

500

NO

35L-20PP

scf7180000011006

479

NO

35L-20PP

scf7180000011007

302

NO

35L-20PP

scf7180000010998

280

NO

35L-20PP

scf7180000011000

254

NO

  1. 1 2,822,767 bp Anchored; 102,885 bp Unanchored; 2 Replaced With TCC_BB047M24, TCC_BB055I06 Sanger Assembly; 3 Replaced with TCC_BB034K18 Sanger assembly