Table 1 Characterisation of differentially expressed TDFs in MM from the cDNA-AFLP analysis
TC number and homology | e-value and putative function | |
|---|---|---|
1 | TC172981 similar to DNA-binding PD1-like protein; Pisum sativum, partial (35%) | 6.2 e-36 metabolism |
2 | TC211882 similar to 70 kD heat shock protein; Arabidopsis thaliana partial (25%) | 7.1 e-32 heat shock response |
3 | TC197024 homologue to cytochrome c oxidase subunit 1; Amoebidium parasiticum partial (3%) | 1.1 e-13 oxidation reduction |
4 | TC213206 homologue to calcium/calmodulin-dependent protein kinase CaMK3; Nicotiana tabacum, partial (47%) | 1.0 e-209 heat shock response |
5 | AM821191 similar to putative peptide transporter; Arabidopsis thaliana, partial (13%) | 7.9 e-81 transport |
6 | TC204777 similar to amino acid transporter-like protein; Arabidopsis thaliana, partial (57%) | 2.7 e-32 transport |
7 | TC200797 similar to 4Fe-4S ferredoxin iron-sulfur binding domain protein; Alkalilimnicola ehrlichel, partial (7%) | 9.0 e-0.7 transport |
8 | TC191544 Phosphosulfolactate synthase-related protein; Solanum lycopersicum, complete | 4.8 e-22 heat shock response |
9 | TC495251 similar to OSJNBb0015D13.13 protein; Oryza sativa, partial (87%) | 0.996 Metabolism, cell wall |
10 | TC209114 homologue to 40S ribosomal protein S8-like protein; Solanum tuberosum, complete | 2.6 e-28 translation |
11 | BM066544 weakly similar to TGF-beta receptor type l/lI extracellular region; Medicago truncatula, partial (8%) | 2.4 e-41 transport |
12 | TC197929 similar to uncharacterized protein; Vitis vinifera partial (44%) | 8.8 e-12 unknown |
13 | BI209494 similar to Os02g0159700 protein; Oryza sativa Japonica Group, partial (44%) | 8.6 e-08 oxidation reduction |
14 | TC208178 similar to P70 protein; Nicotiana tabacum partial (42%) | 3.6 e-12 heat shock response |
15 | TC208223 Similar to cytosolic ascorbate peroxidase 1; Solanum lycopersicum, partial (32%) | 1.1 e-19 oxidation reduction |
16 | TC210545 similar to 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; Vitis vinifera, partial (66%) | 0.26 metabolism |
17 | EL492476 homologue to succinyl-CoA ligase alpha 1 subunit; Solanum lycopersicum, partial (7%) | 0.992 metabolism |
18 | TC203685 similar to DnaJ protein; Arabidopsis thaliana, partial (24%) | 1.6 e-19 heat shock response |
19 | TC198815 weakly similar to RNA polymerase Rpb4; Medicago truncatula, partial (52%) | 2.3 e-38 translation |
20 | TC193737 homologue to ribosomal protein S6-like protein; Solanum tuberosum, complete | 3.6 e-41 Translation |
21 | TC197647 similar to elicitor-inducible protein EIG-J7; Capsicum annuum, partial (84%) | 6.0e-13 stress response |
22 | TC200797 similar to 4Fe-4S ferredoxin iron-sulfur binding domain protein; Alkalilimnicola ehrlichei, partial (7%) | 2.8 e-34 transport |
23 | EB174193 similar to chromosome chrl scaffold_5 whole genome shotgun sequence; Wis vinifera, Rep:, partial (13%) | 0.048 unknown |
24 | BY840013 Similar to Zea mays 18S ribosomal RNA gene partial sequence, partial (20%) | 3.1 e-80 translation |
25 | TC213983 similar to chromosome chr15 scaffold_40 whole genome shotgun sequence; Vitis vinifera, partial (10%) | 3.1 e-27 unknown |