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Table 5 Synteny blocks between T. cacao (Matina 1-6) physical map and reference genome assemblies

From: A genetically anchored physical framework for Theobroma cacao cv. Matina 1-6

Reference Genome 1Anchors 1Block Hits 1One block 1Two blocks Blocks (< 1 Mbp) Blocks (1 Mbp - 3 Mbp) Blocks (> 3 Mbp)
V. vinifera 13,807 (0) 3,266 (0) 2712 (0) 277 (0) 27 43 31
P. trichoptera 10,788 (57) 5,535 (15) 2,517 (7) 1,509 (4) 87 61 39
A. thaliana 5,391 (59) 697 (1) 583 (1) 61 (4) 50 14 4
T. cacao (Criollo) 37,504 (194) 26,739 (130) 21,765 (108) 2,487 (11) 56 25 31
  1. 1Total anchors (BES + genetic markers) with genetic marker subset in parentheses.