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Table 1 Summary of external resources accessed directly from GDP

From: Datgan, a reusable software system for facile interrogation and visualization of complex transcription profiling data

Database Acronym Brief description Home page address
Mouse Genome Informatics MGI Gene catalogues, links to additional resources including phenotype data, genome browsers and SNP databases http://www.informatics.jax.org/
EntrezGene@NCBI EntrezGene Gene catalogues, links to additional resources including genome browsers and SNP databases http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene
Online Medelian Inheritance in Man OMIM Disease-oriented information http://www.ncbi.nlm.nih.gov/omim/
The Gene Ontology@MGI GO Controlled vocabulary for functional attributes http://www.informatics.jax.org/searches/GO_form.shtml
Kyoto Encyclopedia of Genes and Genomes KEGG Biological pathways http://www.genome.jp/kegg/
Ensembl Genome Browser Ensembl Determine alignment of probe sets onto genome sequence http://www.ensembl.org
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BMC Genomics

ISSN: 1471-2164

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