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Table 3 Length, base composition and sequence divergence of M, F genes and URs in Musculista senhousia.

From: Mitochondrial genomes and Doubly Uniparental Inheritance: new insights from Musculista senhousia sex-linked mitochondrial DNAs (Bivalvia Mytilidae)

Gene/Region

F/M

Length

Base Composition (% T, C, A, G)

pD ± SE

UR1-27/LUR

M

4296

37.8

11.2

31.4

19.5

NA

UR1-29/LUR

F

6798

37.9

10.4

30.8

20.9

NA

rrnL

M

1682

37.3

12.6

30.8

19.3

0.343 ± 0.015

 

F

1130

35.8

13.5

30.4

20.3

 

rrnS

M

900

36.0

11.6

33.1

19.3

0.093 ± 0.009

 

F

818

37.2

11.0

32.2

19.7

 

all rRNA genes

M

2582

36.3

12.2

31.6

19.3

0.209 ± 0.010

 

F

1948

36.4

12.4

31.2

20.0

 

atp6

M

714

43.8

12.7

23.5

19.9

0.258 ± 0.016

 

F

714

42.2

12.9

23.8

21.1

 

atp8

M

192

42.2

14.1

27.6

16.1

0.281 ± 0.037

 

F

135

43.0

12.6

25.9

18.5

 

cox1

M

1584

38.3

15.9

24.7

21.1

0.180 ± 0.009

 

F

1584

40.0

14.4

24.4

21.3

 

cox2

M

690

36.7

15.2

26.7

21.4

0.264 ± 0.016

 

F

660

37.4

14.5

27.3

20.8

 

cox2b

M

813

35.9

14.1

28.7

21.3

0.267 ± 0.016*

 

F

NA

NA

 

cox3

M

855

42.0

13.1

23.3

21.6

0.220 ± 0.012

 

F

855

43.4

12.9

20.9

22.8

 

cob

M

1197

40.6

13.9

25.2

20.3

0.106 ± 0.009

 

F

1197

40.4

13.6

24.9

21.1

 

nad1

M

996

39.8

12.2

26.0

22.0

0.227 ± 0.014

 

F

993

41.3

11.5

24.4

23.2

 

nad2

M

945

44.9

10.8

24.4

19.9

0.302 ± 0.013

 

F

945

44.1

10.9

22.4

22.5

 

nad3

M

375

44.3

14.1

21.3

20.3

0.267 ± 0.021

 

F

390

45.6

12.6

21.0

20.8

 

nad4

M

1329

41.4

11.5

23.6

23.5

0.273 ± 0.013

 

F

1320

39.9

11.9

24.3

23.9

 

nad4L

M

216

43.5

8.8

24.5

23.1

0.199 ± 0.027

 

F

216

44.0

8.8

24.5

22.7

 

nad5

M

1765

39.5

13.2

27.9

19.4

0.285 ± 0.011

 

F

1750

38.7

13.3

25.7

22.3

 

nad6

M

624

43.8

11.4

25.6

19.2

0.217 ± 0.017

 

F

624

42.1

12.3

25.2

20.4

 

all proteins

M

12295

40.6

13.2

25.4

20.9

0.231 ± 0.004#

 

F

11383

40.9

12.8

24.1

22.1

 

complete

M

20612

39.3

12.7

27.7

20.3

NA

 

F

21557

39.3

12.0

27.2

21.4

 
  1. UR = Unassigned Regions.
  2. NA = Not Available.
  3. pD = p-Distance.
  4. SE = Standard Error.
  5. *: pD between Mcox2 and Mcox2b genes.
  6. #: Mcox2b gene was excluded from the computation of overall pD.