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Table 3 Putative P. larvae flagellar proteins

From: Updated genome assembly and annotation of Paenibacillus larvae, the agent of American foulbrood disease of honey bees

 

Gene

Protein, functional information from CDD

P. larvae protein accession

Two component system chemotaxis proteins

cheA

CheA, sensor kinase [EC:2.7.13.3]

EFX46098; EFX46097

 

cheW

CheW, purine-binding protein

EFX46097

 

cheX

CheX

Not found

 

cheC

CheC

EFX44110; EFX46096

 

cheD

CheD [EC:3.5.1.44]

EFX46095

 

cheR

CheR, methyltransferase [EC:2.1.1.80]

EFX46532

 

cheB

CheB, response regulator [EC:3.1.1.61]

EFX46099

 

cheY

CheY, response regulator

EFX46498; EFX46108

 

cheZ

CheZ

EFX46498

 

cheV

CheV, response regulator

EFX46097; EFX46099

Methyl-accepting chemotaxis proteins

mcp

methyl-accepting chemotaxis protein

EFX44725; EFX44051; EFX45552; EFX46097

 

tsr

McpI, serine sensor receptor

EFX44051; EFX44725

 

tar

McpII, aspartate sensor receptor

EFX44725; EFX46877

 

trg

McpIII, ribose and galactose sensor receptor

EFX44725

 

tap

McpIV, peptide sensor receptor

Not found

 

aer

Aerotaxis receptor

EFX44725; EFX46877

 

hemAT

haem-based aerotactic transducer

EFX44725; EFX46877

Type-III secretion proteins for flagellar assembly

fliH

FliH

EFX46029

 

fliI

FliI, flagellum-specific ATP synthase [EC:3.6.3.14]

EFX46028

 

fliZ, fliO

FliO/FliZ

EFX46107

 

fliP

FliP, flagellar biosynthetic protein

EFX46106

 

fliQ

FliQ, flagellar biosynthetic protein

EFX46105

 

fliR

FliR, flagellar biosynthetic protein

EFX46104

 

flhA

FlhA, flagellar biosynthesis protein

EFX46102

 

flhB

FlhB, flagellar biosynthetic protein

EFX46103

 

flhE

FlhE

Not found

 

flhF

FlhF, flagellar biosynthetic protein

EFX46101

Motor/Switch

motA

MotA, chemotaxis protein

EFX45489

 

motB

MotB, chemotaxis protein

EFX45490

C-ring

fliG

FliG, flagellar motor switch protein

EFX46030

 

fliM

FliM, flagellar motor switch protein

EFX46110

 

fliNY, fliN

FliN/FliY, flagellar motor switch protein

EFX46109

M, S, P and L rings

fliF

FliF, flagellar M-ring protein

EFX46031

 

flgI

FlgI, flagellar P-ring protein precursor

not found

 

flgA

FlgA, flagella basal body P-ring formation protein

not found

 

flgH

FlgH, flagellar L-ring protein precursor

not found

 

fliF

FliF, flagellar M-ring protein

EFX46031

 

flgA

FlgA, flagella basal body P-ring formation protein

not found

 

flgH

FlgH, flagellar L-ring protein precursor

not found

Rod, hook, and filament

flgB

FlgB, flagellar basal-body rod protein

EFX46034

 

flgC

FlgC, flagellar basal-body rod protein

EFX46033

 

flgD

FlgD, flagellar basal-body rod modification protein

not found

 

flgF

FlgF, flagellar basal-body rod protein

EFX46113; EFX45368

 

flgG

FlgG, flagellar basal-body rod protein

EFX46113; EFX45367

 

flgJ

FlgJ, flagellar protein

not found

 

flgE

FlgE, flagellar hook protein

EFX46113

 

fliE

FliE, flagellar hook-basal body complex protein

EFX46032

 

flgK

FlgK, flagellar hook-associated protein 1

EFX46010

 

flgL

FlgL, flagellar hook-associated protein 3

EFX46011

 

fliD

FliD, flagellar hook-associated protein 2

EFX46016

 

fliK

FliK, flagellar hook-length control protein

not found

 

fliL

FliL, flagellar protein

EFX46111

 

fliC

Flagellin

EFX46015

 

flaF

FlaF, flagellar protein

EFX46015

 

flaG

FlaG, flagellar protein

not found

 

flbA

FlbA, flagellar protein

EFX46102

 

flbB

FlbB, flagellar protein

not found

 

flbC

FlbC, flagellar protein

not found

 

flbD

FlbD, flagellar protein

not found

 

flbT

FlbT, flagellar protein

not found

Regulation

flhC

FlhC, flagellar transcriptional activator

not found

 

flhD

FlhD, flagellar transcriptional activator

not found

 

fliA

FliA, RNA polymerase sigma factor for flagellar operon

EFX44501;EFX46093; EFX43745; EFX44502

 

flgM

FlgM, negative regulator of flagellin synthesis

not found

Chaperones

flgN

FlgN, flagella synthesis protein

not found

 

fliJ

FliJ, flagellar protein

EFX46027

 

fliS

FliS, flagellar protein

EFX46017

 

fliT

FliT, flagellar protein

not found

 

fliW

FliW, flagellar assembly factor

EFX46013

 

fliY

FliY, cystine transport system substrate-binding protein

EFX46109

 

fliZ

FliZ

EFX46107

Archaeal flagellar proteins

flaA-A, flaA

FlaA, archaeal flagellin

EFX46015

 

flaB-A, flaB

FlaB, archaeal flagellin

EFX46015

 

flaC-A, flaC

FlaC

EFX46015

 

flaD-A, flaD

FlaD

EFX46015

 

flaE-A, flaE

FlaE

EFX46113

 

flaF-A, flaF

FlaF

EFX46015

 

flaG-A, flaG

FlaG

not found

 

flaH-A, flaH

FlaH

not found

 

flaI-A, flaI

FlaI

not found

 

flaJ-A, flaJ

FlaJ

not found

 

flaK-A, flaK

FlaK, archaeal preflagellin peptidase

not found