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Table 4 Functional divergence estimated in OPT paralogs

From: Analyses of the oligopeptide transporter gene family in poplar and grape

Comparison

θ1

SE2

LRT3

N(0.5)4

N(0.7)4

Class YSL/Class OPT

0.8592

0.035797

576.1111

277

259

Group 2/Group 5

0.001

0.022361

0

0

0

Group 2/Group 6

0.4576

0.085419

28.69854

68

24

Group 2/Group 7

0.8136

0.111007

53.71832

280

272

Group 2/Group 8

0.9992

0.110362

81.9717

280

280

Group 2/Group 9

0.78

0.149011

27.40026

280

261

Group 2/Group 10

0.9992

0.085793

135.6435

280

280

Group 2/Group 11

0.8176

0.183891

19.76782

280

277

Group 4/Group 5

0.0682

0.096501

0.499466

0

0

Group 4/Group 6

0.2944

0.067278

19.14823

31

7

Group 4/Group 7

0.6616

0.07072

87.5186

262

187

Group 4/Group 8

0.8456

0.081838

106.7636

279

272

Group 4/Group 9

0.664

0.084659

61.51604

256

211

Group 4/Group 10

0.8112

0.063991

160.7009

278

255

Group 4/Group 11

0.6936

0.093695

54.80009

271

233

Group 5/Group 6

0.0162

0.106826

0.022997

3

2

Group 5/Group 7

0.6824

0.104652

42.5189

270

212

Group 5/Group 8

0.808

0.11001

53.9456

277

272

Group 5/Group 9

0.6632

0.138302

22.99485

272

220

Group 5/Group 10

0.8264

0.088168

87.85369

279

268

Group 5/Group 11

0.5936

0.149554

15.75407

263

239

Group 6/Group 7

0.7312

0.068942

112.4879

272

215

Group 6/Group 8

0.7312

0.076661

90.97606

271

222

Group 6/Group 9

0.58

0.075415

59.1481

233

157

Group 6/Group 10

0.7152

0.05871

148.3988

266

212

Group 6/Group 11

0.3656

0.089522

16.67828

31

4

Group 7/Group 8

0.1832

0.063668

8.279587

9

2

Group 7/Group 9

0.3552

0.07426

22.87913

30

11

Group 7/Group 10

0.2584

0.055745

21.4871

27

7

Group 7/Group 11

0.1264

0.071182

3.153215

2

1

Group 8/Group 9

0.1

0.06825

2.146829

1

0

Group 8/Group 10

0.168

0.060741

7.649795

4

2

Group 8/Group 11

0.2936

0.100349

8.560273

10

2

Group 9/Group 10

0.148

0.068012

4.73535

3

0

Group 9/Group 11

0.1058

0.1249

0.71754

0

0

Group 10/Group 11

0.156

0.088912

3.078442

2

0

  1. 1θ is the coefficient of functional divergence.
  2. 2SE: standard error.
  3. 3LRT is a likelihood ratio test.
  4. 4N(0.5) and N(0.7)means the numbers of divergent residues when the cut-off value is 0.5 and 0.7, respectively.