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Table 3 Top three network functions obtained by IPA for the differentially expressed genes of each comparison 3 days after scale removal.

From: Skin healing and scale regeneration in fed and unfed sea bream, Sparus auratus

Group Top Network Functions Score Focus Molecules
Control v. Without scales (WS)
  Small Molecule Biochemistry, Genetic Disorder, Metabolic Disease 34 17
  Cell Morphology, Cancer, Cell Cycle 29 15
  Cell-To-Cell Signaling and Interaction, Cellular Movement, Tissue Development 26 13
Control v. Starved (ST)
  Lipid Metabolism, Nucleic Acid Metabolism, Small Molecule Biochemistry 46 22
  Cellular Development, Cellular Growth and Proliferation, Connective Tissue Development and Function 31 16
  Cell-To-Cell Signaling and Interaction, Hematological System Development and Function, Immune Cell Trafficking 30 16
Control v. Starved without scales (STWS)
  Cancer, Gastrointestinal Disease, Tumor Morphology 39 20
  Cancer, Reproductive System Disease, Genetic Disorder 30 16
  Lipid Metabolism, Molecular Transport, Small Molecule Biochemistry 26 14
Starved (ST) v. Starved without scales (STWS)
  Cancer, Gastrointestinal Disease, DNA Replication, Recombination, and Repair 46 27
  Lipid Metabolism, Small Molecule Biochemistry, Vitamin and Mineral Metabolism 39 24
  Endocrine System Development and Function, Lipid Metabolism, Skeletal and Muscular System Development and Function 36 23
  1. Score and number of molecules in each network are given.