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Table 5 "Top 20 known genes" up-regulated in the fasted group (ST) in relation to the control (N) on day 3.

From: Skin healing and scale regeneration in fed and unfed sea bream, Sparus auratus

Clone

LogFold

adj P-val

Acc. Number

Gene Identification

Putative function

SAPD06994

4.485

0.017

NP_001073454

Cardiomyopathy associated 5

Maintenance of structural integrity of muscle cells, involved in muscle biology and pathology.

SAPD01696

4.201

0.000

Q6B4J3

Alcohol dehydrogenase Class VI

Oxidoreductase, but also developmental regulation in medaka.

SAPD22431

3.956

0.006

IPI00015568

Homolog of Homo sapiens Protein KIAA0711

Transcriptional repression.

SAPD06947

3.919

0.038

NP_001019764

Zinc finger, MYND domain containing 17

Functions as a co-repressor. Control of proliferation.

SAPD25996

3.677

0.001

Q9BY76

Angiopoietin-related protein 4 precursor

Inhibition of proliferation, migration and tubule formation of endothelial cells. May exert a protective action on endothelial cells via endocrine action.

SAPD07090

3.525

0.013

Q96RU2

Ubiquitin carboxyl-terminal hydrolase 28

DNA damage response check point. Regulates myc which is involved in cell proliferation, growth and apoptosis.

SAPD09760

3.499

0.001

IPI00298828

Beta-2-glycoprotein I precursor

Blood coagulation and immune response.

SAPD06461

3.484

0.001

Q9BY76

Angiopoietin-related protein 4 precursor

Inhibition of proliferation, migration and tubule formation of endothelial cells. May exert a protective action on endothelial cells via endocrine action.

SAPD20351

3.415

0.000

IPI00298828

Beta-2-glycoprotein I precursor

Blood coagulation and immune response.

SAPD20440

3.230

0.000

NP_065109

Patatin-like phospholipase domain containing 2

Energy homeostasis. May play a role in response of organism to starvation, enhancing hydrolysis of triglycerides etc to be used in situations of energy depletion.

SAPD25836

3.176

0.001

Q9Y3D2

Methionine-R-sulfoxide reductase B2

Antioxidant repair.

SAPD14080

2.926

0.003

O75385

Serine/threonine-protein kinase ULK1

Involved in autophagy, induced by nutrient depletion to provide amino acids within cells.

SAPD02047

2.925

0.008

Q90278

Homolog of Carassius auratus Kainate receptor beta subunit.

Synaptic plasticity.

SAPD22329

2.511

0.000

Q8TAV3

Cytochrome P450 2W1 EC 1.14.14.- CYPIIW1

Oxidative degradation and detoxification.

SAPD10144

2.426

0.003

Q15119

2 Pyruvate dehydrogenase kinase isoform 2

Regulation of glucose metabolism.

SAPD23550

2.415

0.016

Q99972

Myocilin precursor Trabecular meshwork-induced glucocorticoid response protein

Obstruction of fluid outflow from trabecular network in the eye, but functions in other tissues unknown. Glucocorticoid response protein.

SAPD08799

2.392

0.002

IPI00328648

Homolog of Homo sapiens CD151 antigen

Involved in cellular processes including cell adhesion and migration.

SAPD08134

2.331

0.004

P28906

Hematopoietic progenitor cell antigen CD34 precursor

Cell-cell or cell-matrix adhesion. Role in early haematopoiesis.

SAPD06600

2.263

0.013

NP_060650

DEAD/H Asp-Glu-Ala-Asp/His box polypeptide 32

RNA metabolism, gene regulation.

SAPD01688

2.233

0.023

Q6PH41

Glutathione S-transferase, theta 3

Antioxidant, stress protein.

  1. The "Top 20 known genes" were taken from 45 transcripts of which 25 showed no match to genes of known function. Putative function was assigned via BLAST sequence similarity searches. All matches are in excess of 1.0 e-10. Table definitions are the same as for Table 4.