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Table 5 "Top 20 known genes" up-regulated in the fasted group (ST) in relation to the control (N) on day 3.

From: Skin healing and scale regeneration in fed and unfed sea bream, Sparus auratus

Clone LogFold adj P-val Acc. Number Gene Identification Putative function
SAPD06994 4.485 0.017 NP_001073454 Cardiomyopathy associated 5 Maintenance of structural integrity of muscle cells, involved in muscle biology and pathology.
SAPD01696 4.201 0.000 Q6B4J3 Alcohol dehydrogenase Class VI Oxidoreductase, but also developmental regulation in medaka.
SAPD22431 3.956 0.006 IPI00015568 Homolog of Homo sapiens Protein KIAA0711 Transcriptional repression.
SAPD06947 3.919 0.038 NP_001019764 Zinc finger, MYND domain containing 17 Functions as a co-repressor. Control of proliferation.
SAPD25996 3.677 0.001 Q9BY76 Angiopoietin-related protein 4 precursor Inhibition of proliferation, migration and tubule formation of endothelial cells. May exert a protective action on endothelial cells via endocrine action.
SAPD07090 3.525 0.013 Q96RU2 Ubiquitin carboxyl-terminal hydrolase 28 DNA damage response check point. Regulates myc which is involved in cell proliferation, growth and apoptosis.
SAPD09760 3.499 0.001 IPI00298828 Beta-2-glycoprotein I precursor Blood coagulation and immune response.
SAPD06461 3.484 0.001 Q9BY76 Angiopoietin-related protein 4 precursor Inhibition of proliferation, migration and tubule formation of endothelial cells. May exert a protective action on endothelial cells via endocrine action.
SAPD20351 3.415 0.000 IPI00298828 Beta-2-glycoprotein I precursor Blood coagulation and immune response.
SAPD20440 3.230 0.000 NP_065109 Patatin-like phospholipase domain containing 2 Energy homeostasis. May play a role in response of organism to starvation, enhancing hydrolysis of triglycerides etc to be used in situations of energy depletion.
SAPD25836 3.176 0.001 Q9Y3D2 Methionine-R-sulfoxide reductase B2 Antioxidant repair.
SAPD14080 2.926 0.003 O75385 Serine/threonine-protein kinase ULK1 Involved in autophagy, induced by nutrient depletion to provide amino acids within cells.
SAPD02047 2.925 0.008 Q90278 Homolog of Carassius auratus Kainate receptor beta subunit. Synaptic plasticity.
SAPD22329 2.511 0.000 Q8TAV3 Cytochrome P450 2W1 EC 1.14.14.- CYPIIW1 Oxidative degradation and detoxification.
SAPD10144 2.426 0.003 Q15119 2 Pyruvate dehydrogenase kinase isoform 2 Regulation of glucose metabolism.
SAPD23550 2.415 0.016 Q99972 Myocilin precursor Trabecular meshwork-induced glucocorticoid response protein Obstruction of fluid outflow from trabecular network in the eye, but functions in other tissues unknown. Glucocorticoid response protein.
SAPD08799 2.392 0.002 IPI00328648 Homolog of Homo sapiens CD151 antigen Involved in cellular processes including cell adhesion and migration.
SAPD08134 2.331 0.004 P28906 Hematopoietic progenitor cell antigen CD34 precursor Cell-cell or cell-matrix adhesion. Role in early haematopoiesis.
SAPD06600 2.263 0.013 NP_060650 DEAD/H Asp-Glu-Ala-Asp/His box polypeptide 32 RNA metabolism, gene regulation.
SAPD01688 2.233 0.023 Q6PH41 Glutathione S-transferase, theta 3 Antioxidant, stress protein.
  1. The "Top 20 known genes" were taken from 45 transcripts of which 25 showed no match to genes of known function. Putative function was assigned via BLAST sequence similarity searches. All matches are in excess of 1.0 e-10. Table definitions are the same as for Table 4.