Table 8 Known Genes up-regulated in the 7 day sampling.
From: Skin healing and scale regeneration in fed and unfed sea bream, Sparus auratus
Clone | LogFold | adj P-val | Acc. Number | Gene Identification | Putative function |
|---|---|---|---|---|---|
Group without scales (WS) in relation to the control (N) | |||||
SAPD11984 | 5.158 | 0.002 | Q6E5T5 | Claudin 1 | Calcium-independent cell-adhesion activity. |
SAPD02183 | 3.186 | 0.015 | IPI00028413 | Inter-alpha globulin Inhibitor H3 | Hyaluronan metabolic processes. |
SAPD18084 | 2.505 | 0.012 | NP_001012506 | Hypothetical protein LOC503524 | Oxidoreductase. Potential role in ketone utilisation as a secondary energy source or generate precursors for lipid and sterol synthesis. |
SAPD01661 | 2.356 | 0.019 | Q5PSM1 | Betaine homocysteine methyltransferase | Involved in methionine and betaine production (membrane composition, osmolyte concentrations and protein unfolding). |
SAPD00429 | 1.129 | 0.013 | Q14691 | DNA replication complex GINS protein PSF1 | Essential role in DNA replication. |
SAPD11480 | 1.049 | 0.032 | NP_001011729 | Transforming acidic coiled coil 3 | Involved in centrosome/mitotic spindle dynamics, gene regulation. |
Group starved (ST) in relation to the control (N) | |||||
SAPD06461 | 3.250 | 0.003 | Q9BY76 | Angiopoietin-related protein 4 precursor | Inhibition of proliferation, migration and tubule formation of endothelial cells. May exert a protective action on endothelial cells via endocrine action. |
SAPD25996 | 2.942 | 0.011 | Q9BY76 | Angiopoietin-related protein 4 precursor | Inhibition of proliferation, migration and tubule formation of endothelial cells. May exert a protective action on endothelial cells via endocrine action. |
SAPD10144 | 1.903 | 0.023 | Q15119 | Pyruvate dehydrogenase kinase isoform 2 | Regulation of glucose metabolism. |
SAPD22443 | 1.672 | 0.008 | Q96DE5 | Uncharacterized protein C10orf104 | Cell cycle control. |
SAPD13172 | 1.576 | 0.014 | NP_001018326 | villin 2 ezrin like | Involved the cytoskeleton, may influence rho signalling pathways. |
Group starved and without scales (7STWS) in relation to the control (7N) | |||||
SAPD06461 | 2.772 | 0.011 | Q9BY76 | Angiopoietin-related protein 4 precursor | Inhibition of proliferation, migration and tubule formation of endothelial cells. May exert a protective action on endothelial cells via endocrine action. |
SAPD13675 | 2.203 | 0.029 | P40313 | Chymotrypsin-like protease CTRL-1 precursor | Protein degradation, degradation of old proteins for nutrition, control of protein activity, defense activity. |
SAPD18879 | 1.437 | 0.007 | P50570 | Dynamin-2 | Involved in the cytoskeleton and muscle structure. |
SAPD00429 | 1.411 | 0.002 | Q14691 | DNA replication complex GINS protein PSF1 | Essential role in DNA replication. |
Group starved and without scales (7STWS) in relation to starved group (7ST) | |||||
SAPD03340 | 3.815 | 0.002 | Q6P0E4 | Type I cytokeratin, enveloping layer | Structural protein. |
SAPD01645 | 3.471 | 0.028 | Q99895 | Caldecrin precursor (Chymotrypsin C) | Protease activity and hypocalcaemic activity: decreases serum calcium. |
SAPD03019 | 1.759 | 0.044 | P35222 | Catenin beta-1 Beta-catenin | Regulation of cell adhesion. Transcriptional co-activator via the Wnt pathway (development, cell proliferation and differentiation). |
SAPD00618 | 1.469 | 0.007 | NP_998168 | Hypothetical protein LOC406276 | Important role in the modification and proliferation of neurons. |
SAPD00429 | 1.199 | 0.009 | Q14691 | DNA replication complex GINS protein PSF1 | Essential role in DNA replication. |
SAPD21979 | 1.121 | 0.037 | P50454 | Serpin H1 precursor | Essential in collagen synthesis. |