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Figure 5 | BMC Genomics

Figure 5

From: Transcriptomic analysis of the interaction between Helianthus annuus and its obligate parasite Plasmopara halstedii shows single nucleotide polymorphisms in CRN sequences

Figure 5

Time course analysis by Q-RT-PCR of 8 putative PhCRN effectors. a. Table of the p-values obtained by ANOVA analysis corresponding to following effects: block (for biological repetition), dpi (3, 6, 10 and 14), race (710 and 334), "type" (compatible: XRQ-334/PSC8-710 vs. incompatible: XRQ-710/PSC8-334), and the interactions between these 3 effects. Highlighted p-values are significant at Bonferonni test (α = 0.05 for the eight genes and for each tested effect). b. Time-course expression of 6 putative P. halstedii PhCRN effector genes, by Quantitative RT-PCR analysis, showing significant dpi effect. c. Time-course expression of 2 putative P. halstedii PhCRN effector genes, by Quantitative RT-PCR analysis, showing significant type effect. d. Time-course expression of putative P. halstedii PhCRN11 effector gene, by Quantitative RT-PCR analysis, showing significant race effect. (b, c and d) Mean expression values (- ΔCt) and standard errors are given from three independent biological experiments. In each biological experiment, the samples of three replicates were pooled before Quantitative RT-PCR assay.

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