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Table 2 Hits organized by genes in the K/P JAK/STAT screen.

From: False negative rates in Drosophila cell-based RNAi screens: a case study

Gene Number of dsRNAs Number of scoring dsRNAs Number of non-scoring dsRNAs Category Expressed in S2R+ Cells
Abl 4 4 0 1 Yes
CycA 3 3 0 1 Yes
dome 3 3 0 1 Yes
hop 3 3 0 1 Yes
mts 2 2 0 1 Yes
CycE 3 2 1 2 Yes
Pp4-19C 4 2 2 2 Yes
CG17090 3 2 1 2 Yes
puc 3 2 1 2 Yes
CG34318 | CG8179 4 1 3 3 No
CanA1 3 1 2 3 No
CG4839 3 1 2 3 No
CG7597 3 1 2 3 Yes
CG9389 3 1 2 3 No
mtm 3 1 2 3 Yes
Pi3K21B 3 1 2 3 Yes
smi35A 3 1 2 3 Yes
Src42A 3 1 2 3 Yes
CG8509 2 1 1 3 No
gskt 2 1 1 3 No
htl 2 1 1 3 No
Myt1 2 1 1 3 Yes
Pp1-Y2 2 1 1 3 No
S6k 2 1 1 3 Yes
  1. Genes were included on this list if at least one dsRNA yielded a Z-score of +/- 2 or better across both replicates. The number of dsRNAs in the K/P set is indicated as well as the number of those dsRNAs that were scored in the screen with a Z-score with an absolute value of 1.5 or better. Genes were binned into 3 categories: Category 1 contains genes where 4 out of 4 or 3 out of 3 or 2 out of 2 dsRNAs scored. Category 2 contains genes where 2 out of 3 or 2 out of 4 or 3 out of 4 dsRNAs scored. Category 3 contains genes where only 1 dsRNA scored. A gene was defined to be expressed in S2R+ if the FPKM value was greater than 1.