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Table 2 List of top 50 genes significantly differentially regulated in the skeletal muscle based on fold difference (t-test).

From: Gene expression profiling in the Cynomolgus macaque Macaca fascicularis shows variation within the normal birth range

Gene Symbol 2Way ANOVA P value Fold Change in Skeletal muscle, Welch t-test Regulation in LBW Fold change Liver, Welch t-test Regulation in LBW Fold change in Cords, Welch t-test Regulation in LBW Gene name
XM_116936 0.017913306 10.054285 up 1.080386 up 2.185324 up PREDICTED: Homo sapiens similar to RIKEN cDNA 4832428D23 gene (LOC196541) mRNA [XM_116936]
XM_056254 0.021895792 9.569201 up 2.09208 down 1.391897 up PREDICTED: Homo sapiens heparan sulfate (glucosamine) 3-O-sulfotransferase 4 (HS3ST4) mRNA [XM_056254]
C5orf23 0.01475329 6.0808635 up 1.072585 up 1.301361 up Homo sapiens chromosome 5 open reading frame 23 (C5orf23), mRNA [NM_024563]
PASK 0.03426426 5.977056 up 2.995584 up 19.17474 up Homo sapiens PAS domain containing serine/threonine kinase (PASK), mRNA [NM_015148]
WDR8 0.004681234 5.6804295 down 2.978104 down 8.061375 down Homo sapiens WD repeat domain 8 (WDR8), mRNA [NM_017818]
ADK 1.63E-04 5.639505 down 1.368648 down 9.386349 down Homo sapiens adenosine kinase (ADK), transcript variant ADK-short, mRNA [NM_001123]
APOBEC3G 0.040698703 4.8567457 down 1.669566 down 1.105857 down Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G (APOBEC3G), mRNA [NM_021822]
CCL2 0.002121243 4.757898 down 1.287543 down 2.895307 down Homo sapiens chemokine (C-C motif) ligand 2 (CCL2), mRNA [NM_002982]
A_01_P013390 0.029869065 4.6248507 down 1.099004 down 1.527467 down  
BC044226 0.04677891 4.3998837 down 1.966762 down 1.502299 down Homo sapiens myosin binding protein H, mRNA [BC044226]
CCL11 0.008992519 4.050988 down 3.178148 down 1.002582 up Homo sapiens chemokine (C-C motif) ligand 11 (CCL11), mRNA [NM_002986]
POU4F3 0.02459994 3.8642302 up 1.615214 up 1.991698 down Homo sapiens POU domain, class 4, transcription factor 3 (POU4F3), mRNA [NM_002700]
XR_011794 0.010519872 3.7855186 up 3.637105 up 2.76764 up PREDICTED: Macaca mulatta similar to poly(A)-specific ribonuclease (PARN)-like domain containing 1 (LOC707835), mRNA [XR_011794]
H1FOO 0.011109326 3.7804163 up 1.404401 up 1.449255 down Homo sapiens H1 histone family, member O, oocyte-specific (H1FOO), mRNA [NM_153833]
C17orf75 0.001362531 3.7583363 down 3.447702 down 1.443745 down Homo sapiens chromosome 17 open reading frame 75 (C17orf75), mRNA [NM_022344]
RNF216 0.001650785 3.7307158 down 1.504036 down 6.793567 down Homo sapiens TRIAD3 protein (TRIAD3), transcript variant 1, mRNA [NM_207111]
GTSF1 0.017040279 3.6632807 up 4.653995 up 2.487166 up Homo sapiens family with sequence similarity 112, member B (FAM112B), mRNA [NM_144594]
C13orf33 0.006214988 3.5870998 down 2.664488 down 1.061963 up Homo sapiens chromosome 13 open reading frame 33 (C13orf33), mRNA [NM_032849]
CA2 0.033340864 3.5736616 down 3.483002 down 1.194329 up Homo sapiens carbonic anhydrase II (CA2), mRNA [NM_000067]
CO645773 0.03704907 3.5384166 down 2.022003 down 1.474969 down ILLUMIGEN_MCQ_30118 Katze_MMPB Macaca mulatta cDNA clone IBIUW:22572 5' similar to Bases 1 to 42 highly similar to human RARRES3 (Hs.17466), mRNA sequence [CO645773]
MYST3 0.013409907 3.3029778 up 2.827006 up 1.403819 up Homo sapiens MYST histone acetyltransferase (monocytic leukemia) 3 (MYST3), mRNA [NM_006766]
NM_000977 0.008561992 3.2655115 up 2.138359 up 2.014805 up Homo sapiens ribosomal protein L13 (RPL13), transcript variant 1, mRNA. [NM_000977]
XR_014265 0.001382546 3.2319098 down 1.270026 down 2.168579 down PREDICTED: Macaca mulatta hypothetical protein LOC716045 (LOC716045), mRNA [XR_014265]
NM_001004685 0.043442905 3.1747854 up 1.353824 up 1.407273 down Homo sapiens olfactory receptor, family 2, subfamily F, member 2 (OR2F2), mRNA. [NM_001004685]
XR_014204 0.029225934 3.167453 down 3.849135 down 1.084816 up PREDICTED: Macaca mulatta hypothetical protein LOC719546 (LOC719546), mRNA [XR_014204]
DARS 3.99E-05 3.1527941 down 1.10567 down 12.63266 down Homo sapiens aspartyl-tRNA synthetase (DARS), mRNA [NM_001349]
GYLTL1B 9.45E-04 3.143812 up 1.169517 up 3.19979 up Homo sapiens glycosyltransferase-like 1B (GYLTL1B), mRNA [NM_152312]
CNNM2 1.94E-04 3.1423542 up 1.00608 down 1.785853 up Homo sapiens cyclin M2 (CNNM2), transcript variant 1, mRNA [NM_017649]
C20orf26 0.023210809 3.1168563 up 1.353857 up 1.414684 up Homo sapiens chromosome 20 open reading frame 26 (C20orf26), mRNA [NM_015585]
SLC26A9 0.042099766 3.0884879 up 2.137558 up 1.776504 up Homo sapiens solute carrier family 26, member 9 (SLC26A9), transcript variant 1, mRNA [NM_052934]
SEC14L3 0.025527291 3.0402198 up 1.787294 up 1.547541 down Homo sapiens SEC14-like 3 (S. cerevisiae) (SEC14L3), mRNA [NM_174975]
TMEM20 0.001055841 2.9346027 down 1.821723 down 1.558415 down Homo sapiens transmembrane protein 20 (TMEM20), mRNA [NM_153226]
UHRF1 0.042854026 2.9323897 down 1.272487 down 1.455897 down Homo sapiens ubiquitin-like, containing PHD and RING finger domains, 1 (UHRF1), transcript variant 2, mRNA [NM_013282]
CST9L 0.008572864 2.9286344 up 1.46455 up 1.695363 down Homo sapiens cystatin 9-like (mouse) (CST9L), mRNA [NM_080610]
C2 0.005425731 2.906241 down 1.470166 down 1.228973 up Homo sapiens complement component 2 (C2), mRNA [NM_000063]
C7orf62 0.03373279 2.8281868 up 1.466387 up 1.326441 down Homo sapiens hypothetical protein MGC26647 (MGC26647), mRNA [NM_152706]
HOXB13 0.008404698 2.822795 up 1.530259 up 1.061908 down Homo sapiens homeobox B13 (HOXB13), mRNA [NM_006361]
ANLN 0.026928915 2.8110342 down 1.205709 down 1.210447 down Homo sapiens anillin, actin binding protein (ANLN), mRNA [NM_018685]
TMEM45B 0.02836952 2.789488 up 1.108079 up 1.434473 up Homo sapiens transmembrane protein 45B (TMEM45B), mRNA [NM_138788]
COL8A2 0.029133584 2.7760508 down 1.111961 down 2.334076 down Homo sapiens collagen, type VIII, alpha 2 (COL8A2), mRNA [NM_005202]
IL15RA 3.56E-05 2.7710447 down 2.542192 down 5.776398 down Homo sapiens interleukin 15 receptor, alpha (IL15RA), transcript variant 2, mRNA [NM_172200]
AY937248 0.002621024 2.7557867 up 1.074139 down 2.046131 up Macaca mulatta placental protein 14 mRNA, complete cds [AY937248]
SCN3B 0.00199475 2.7342772 up 1.566765 up 1.26591 up Homo sapiens sodium channel, voltage-gated, type III, beta (SCN3B), transcript variant 1, mRNA [NM_018400]
TRIM6 0.005424626 2.7181938 up 1.451755 up 1.960095 up Homo sapiens tripartite motif-containing 6 (TRIM6), transcript variant 1, mRNA [NM_001003818]
TNS4 0.041628703 2.7158492 up 1.315606 up 1.297834 down Homo sapiens tensin 4 (TNS4), mRNA [NM_032865]
PDE1C 0.026903268 2.6685586 up 1.596604 up 1.15087 down Homo sapiens phosphodiesterase 1C, calmodulin-dependent 70kDa (PDE1C), mRNA [NM_005020]
S100A4 0.01836204 2.656307 down 1.047433 down 2.01034 down Homo sapiens S100 calcium binding protein A4 (S100A4), transcript variant 1, mRNA [NM_002961]
AADACL1 0.017924123 2.6216743 down 1.119603 down 1.47176 down Homo sapiens arylacetamide deacetylase-like 1 (AADACL1), mRNA [NM_020792]
XR_011345 0.029255124 2.6165082 up 1.450092 up 1.492756 down PREDICTED: Macaca mulatta similar to otoancorin isoform 1 (LOC699600), mRNA [XR_011345]
FN1 0.02028952 2.6025481 down 1.05622 down 1.051482 down Homo sapiens fibronectin 1 (FN1), transcript variant 1, mRNA [NM_212482]
SP7 3.05E-04 2.5985072 up 1.616763 up 1.088733 down Homo sapiens Sp7 transcription factor (SP7), mRNA [NM_152860]