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Table 1 Numbers of ES-up (U) and ES-down (D) features (FDR < 10%) in different clusters

From: Searching ChIP-seq genomic islands for combinatorial regulatory codes in mouse embryonic stem cells

 

   w= 2

   w= 1

   w= 0

 

U

D

U

D

U

D

uniformly-high cluster

2

0

4

3

1

14

Oct4 cluster

7

186

22

10

8

2

Myc cluster

3

76

7

141

0

63

Oct4-moderate cluster

464

0

366

0

102

0

  1. Note: w denotes the number of main factors, indicating feature types.