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Table 4 Summary of contig assignments to KEGG pathways associated with amino acid biosynthesis and metabolism

From: The transcriptome of the novel dinoflagellate Oxyrrhis marina (Alveolata: Dinophyceae): response to salinity examined by 454 sequencing

KEGG ID Kegg pathway No. of contigs
00250 Alanine, aspartate and glutamate metabolism 8
00260 Glycine, serine and threonine metabolism 11
00270 Cysteine and methionine metabolism 8
00280 Valine, leucine and isoleucine degradation 12
00290 Valine, leucine and isoleucine biosynthesis 3
00300 Lysine biosynthesis 4
00310 Lysine degradation 6
00330 Arginine and proline metabolism 7
00340 Histidine metabolism 2
00350 Tyrosine metabolism 3
00360 Phenylalanine metabolism 4
00380 Tryptophan metabolism 7
00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
00410 Beta-Alanine metabolism 6
00430 Taurine and hypotaurine metabolism 2
00440 Phosphonate and phosphinate metabolism 0
00450 Selenoamino acid metabolism 3
00460 Cyanoamino acid metabolism 2
00471 D-Glutamine and D-glutamate metabolism 0
00472 D-Arginine and D-ornithine metabolism 0
00473 D-Alanine metabolism 0
00480 Glutathione metabolism 8
  1. A complete list of assignments, and identifications are included in Additional file 4.