Table 3 Overview of the length (in bp) of 24 class I SSR primers on the parents of two L.angustifolius recombinant inbred line populations (RILs). The length of the fragments presented is based on the length using the MRT primers which have 14 bp and 16 bp adaptors on the forward and reverse primers respectively
| Â | Tanjil | Unicrop | 83A:476 ("Domestic") | P27255 ("Wild") | ||||
|---|---|---|---|---|---|---|---|---|
| Â | Allele 1 | Allele 2 | Allele 1 | Allele 2 | Allele 1 | Allele 2 | Allele 1 | Allele 2 |
LaSSR_001 | 278 | - | 278 | - | 278 | - | 264 | - |
LaSSR_002 | 243 | - | 243 | - | 243 | - | 226 | - |
LaSSR_003 | 324 | - | 326 | - | 324 | - | 343 | - |
LaSSR_004 | 323 | - | 323 | - | 323 | - | 323 | - |
LaSSR_005 | 325 | - | 327 | - | 325 | - | 344 | - |
LaSSR_006 | No amplicon | - | No amplicon | - | No amplicon | - | No amplicon | - |
LaSSR_007 | 293 | - | 293 | - | 293 | - | 293 | - |
LaSSR_008 | 318 | - | 318 | - | 284 | - | 281 | - |
LaSSR_009 | 328 | - | 328 | - | 328 | - | 300 | - |
LaSSR_010 | 298 | 221 | 277 | 233 | 298 | 233 | 298 | 221 |
LaSSR_011 | 344 | - | 348 | - | 348 | - | 348 | 301 |
LaSSR_012 | 246 | - | 249 | - | 249 | - | 245 | 205 |
LaSSR_013 | 231 | - | 231 | - | 231 | - | 231 | Â |
LaSSR_014 | No amplicon | - | No amplicon | - | No amplicon | - | No amplicon | Â |
LaSSR_015 | 321 | 282 | 289 | 282 | 321 | 282 | 326 | 282 |
LaSSR_016 | No amplicon | - | No amplicon | Â | No amplicon | Â | No amplicon | Â |
LaSSR_017 | 278 | - | 276 | - | 276 | - | 284 | - |
LaSSR_018 | 246 | - | 252 | - | 252 | - | 205 | - |
LaSSR_019 | 266 | - | 266 | - | 254 | - | 250 | - |
LaSSR_020 | 327 | - | 327 | - | 313 | - | 318 | - |
LaSSR_021 | 309 | - | 319 | - | 319 | - | 332 | - |
LaSSR_022 | 300 | - | 298 | - | 298 | - | 300 | - |
LaSSR_023 | 377 | - | 377 | - | 377 | - | 377 | - |
LaSSR_024 | 245 | - | 245 | - | 245 | - | 245 | - |