| Channel catfish | Blue catfish | All catfish |
---|
Contigs under analysis | 523,815 | 525,428 | 526,099 |
Total SNPs | 2,030,410 | 2,497,806 | 4,236,135 |
   Transitions | 1,311,220 | 1,616,477 | 2,751,244 |
   Transversions | 719,190 | 881,329 | 1,484,891 |
SNP/100 bp | 1.6 | 1.8 | 3.0 |
- Putative SNPs include all base variations involved in the sequence assemblies with at least four sequences present at the SNP position with minor allele sequences represented at least twice. All catfish represents both intra-specific and inter-specific SNPs. Note that the total SNPs from all catfish assembly is fewer than the sum of total SNPs from channel catfish and blue catfish due to shared SNP positions in the two catfish species.