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Table 1 Summary of C.acuminata EST sequencing and assembly

From: Pyrosequencing of the Camptotheca acuminata transcriptome reveals putative genes involved in camptothecin biosynthesis and transport

 

Numbers of ESTs

Average

length (bp)

Total bases (bp)

HQ (high quality) ESTs

74,858

384 ± 125

28,746,026

HQ reads for assembly

51,085

351

17,942,116

Contigs

9,145

525 ± 356

4,799,960

Singletons

21,213

351 ± 137

7,445,387

Unigenes (contigs and singletons)

30,358

403

12,245,347