Table 2 Chicken ncRNAs cloned and presented as novel RNAs by Zhang at al [19] are homologs of well-known human ncRNAs
From: SNOntology: Myriads of novel snornas or just a mirage?
RNA ID1 | GenBank ID | RNA name | Identifiable by Rfam search | Identifiable by snoRNAbase search | Cloned and properly identified by Shao et al. [17] |
|---|---|---|---|---|---|
GGN11 | EU240230 | SNORD102B 2 | No | yes | no |
GGN20 | EU240238 | SNORD1B | No | yes | yes (GGgCD64) |
GGN86 | EU240302 | SNORD13 | Yes | yes | no |
GGN120 | EU240333 | fragment of SNORA84 | Yes | yes | no |
GGN148 | EU240352 | SNORD104 | No | yes | no |
GGN100 | EU240315 | SNORD11A | Yes | yes | yes (GGgCD12A) |
GGN71 | EU240287 | SNORD127 | Yes | yes | no |
GGN107 | EU240321 | SNORD81 | Yes | yes | yes (GGgCD31) |
GGN52 | EU240268 | SNORD44 | Yes | yes | yes (GGgCD6) |
GGN34 | EU240252 | SNORD87C | No | yes | yes (GGgCD46a) |
GGN108 | EU240322 | SNORD46A | No | yes | yes (GGgCD47a) |
GGN80 | EU240296 | SNORD62 | No | yes | yes (GGgCD14) |
GGN82 | EU240298 | SNORD4 | Yes | yes | yes (GGgCD4) |
GGN17 | EU240236 | SNORD1A | No | yes | yes (GGgCD64) |
GGN79 | EU240295 | SNORA77 | Yes | yes | yes (GGgACA12) |
GGN72 | EU240288 | SNORA40 | Yes | no | yes (GGgACA20) |
GGN87 | EU240303 | SNORA44 | Yes | yes | no |
GGN58 | EU240274 | SNORA17 | Yes | yes | no |
GGN56 | EU240272 | SNORA15 | Yes | no | no |
GGN32 | EU240250 | SNORA31B | Yes | no | yes (GGgACA38) |
GGN123 | EU240336 | SNORA4 | No | no | yes (GGgACA26) |
GGN74 | EU240290 | SNORA64 | No | no | yes (GGgACA47) |
GGN103 | EU240318 | U4atac | Yes | no | no |
GGN141 | EU240348 | SNORA25 | No | yes | yes (GGgACA11) |
GGN67 | EU240283 | fragment of SCARNA11 | Yes | no | yes (GGgACA29) |
GGN105 | EU240320 | NET3 3 | No | no | no |
GGN68 | EU240284 | SNORD97 | No | yes | no |
GGN46 | EU240262 | SNORD43 | No | yes | yes (GGgCD29) |
GGN147 | EU240351 | Vault RNA | Yes | no | no |
GGN16 | EU240235 | fragment of SNORD46B | No | No | yes (GGgCD47b) |