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Table 1 Description of the 335 eQTLs localized on swine chromosomes.

From: Genetic variability of transcript abundance in pig peri-mortem skeletal muscle: eQTL localized genes involved in stress response, cell death, muscle disorders and metabolism

  eQTL  
  number of eQTL clustered eQTL cM adjusted p-value
SSC1 49 6 83-101 NS
   31 133-149 9.06E-61
SSC2 28 18 51-77 3.14E-12
SSC3 16 4 39-55 NS
SSC4 17 4 61-81 NS
   5 100-131 NS
   4 149-151 NS
SSC5 13 4 1-39 NS
   5 100-150 NS
SSC6 13 5 20-60 NS
   5 80-140 NS
SSC7 12 3 60-80 NS
   6 160-end NS
SSC8 23 5 0-60 NS
   11 63-109 NS
   8 125-180 NS
SSC9 6    
SSC10 29 25 1-5 9.09E-38
SSC11 3    
SSC12 5    
SSC13 29 18 1-39 1.69E-06
   5 85-120 NS
SSC14 7 5 40-60 NS
SSC15 6    
SSC16 44 36 41-65 8.87E-68
SSC17 11 6 0-15 NS
SSC18 24 8 1-10 NS
   15 20-55 0.00010
Total 335 242   
Significant total 154   
72 % of the eQTL are co-localized.  
46 % of the eQTL are co-localized and this enrichment is significant at the chromosome level.  
  1. The number of eQTLs is given for each chromosome. This number is in bold when the chromosome level is significantly high (Bonferroni-corrected p-value). The position of the clusters is given in cM (details are given in Additional files 1, 3 and 4).