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Table 1 Summary of EST data in mock- and SGIV-infected grouper spleen cDNA libraries.

From: Transcriptome analysis of orange-spotted grouper (Epinephelus coioides) spleen in response to Singapore grouper iridovirus

Categary

spleen Library

 
 

Mock-infected

SGIV infected

Total sequenced cDNA

428867

446009

High quality ESTs

407027

421141

Total bp

10620407

11962121

Number of contigs

24246

25536

Number of singlets

36076

40527

N50 of contigs (bp)

504

547

  1. N50 = median length of the sequences of all the contigs
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BMC Genomics

ISSN: 1471-2164

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