Table 8 Gene Ontology terms enriched among the CNVs
From: Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery
Ontology | GO ID | Description | Animal | P-BA | P-HOL |
|---|---|---|---|---|---|
BP | GO:0032502 | Developmental process | Both | 4.3E-21 | 3.5E-40 |
BP | GO:0032501 | Multicellular organismal process | Both | 6E-34 | 3.4E-67 |
BP | GO:0050789 | Regulation of biological process | Both | 0.00042 | 0.00015 |
BP | GO:0002376 | Immune system process | Both | 2.4E-19 | 1.4E-17 |
BP | GO:0016043 | Cellular component organization | Both | 1.3E-07 | 9.7E -12 |
BP | GO:0065007 | Biological regulation | Both | 5.5E-05 | 9.2E-05 |
BP | GO:0048518 | Positive regulation of biological process | Both | 1.3E-35 | 2.6E-29 |
BP | GO:0048519 | Negative regulation of biological process | Both | 5.7E-16 | 1E-30 |
BP | GO:0022610 | Biological adhesion | Both | 8.5E-06 | 0.028 |
BP | GO:0016265 | Death | Both | 1.5E-13 | 2.3E-07 |
BP | GO:0009987 | Cellular process | Both | 0.011 | 0.077 |
BP | GO:0008152 | Metabolic process | Both | 0.0051 | 0.015 |
BP | GO:0051234 | Establishment of localization | Both | 0.011 | 0.00069 |
BP | GO:0051179 | Localization | Both | 0.002 | 3.5E-07 |
BP | GO:0040007 | Growth | Both | 9.7E-07 | 3.8E-16 |
BP | GO:0050896 | Response to stimulus | Both | 3.2E-30 | 9.1E-41 |
BP | GO:0044085 | Cellular component biogenesis | Both | 0.00072 | 0.0044 |
BP | GO:0040011 | Locomotion | BA | 5.4E-12 | - |
BP | GO:0000003 | Reproduction | HOL | - | 1.6E-25 |
BP | GO:0022414 | Reproductive process | HOL | - | 3.8E-18 |
CC | GO:0032991 | Macromolecular complex | Both | 0.007 | 1.6E-05 |
CC | GO:0005623 | Cell | Both | 0.0016 | 0.00025 |
CC | GO:0044464 | Cell part | Both | 0.0016 | 0.00025 |
CC | GO:0044421 | Extracellular region part | Both | 1.2E-14 | 5.8E-13 |
CC | GO:0005576 | Extracellular region | Both | 2E-08 | 7.8E-07 |
CC | GO:0043226 | Organelle | Both | 0.0054 | 4.3E-07 |
CC | GO:0044422 | Organelle part | Both | 0.00024 | 6.8E-10 |
CC | GO:0031974 | Membrane-enclosed lumen | HOL | - | 4.5E-06 |
MF | GO:0060089 | Molecular transducer activity | Both | 0.013 | 0.0031 |
MF | GO:0005215 | Transporter activity | Both | 0.07 | 0.43 |
MF | GO:0003824 | Catalytic activity | Both | 0.071 | 0.095 |
MF | GO:0005488 | Binding | Both | 0.0015 | 0.0032 |
MF | GO:0030528 | Transcription regulator activity | HOL | - | 0.16 |
MF | GO:0030234 | Enzyme regulator activity | HOL | - | 3.6E-09 |