Skip to main content

Table 1 Peach genome scaffold information with the number of SNP's detected on each scaffold.

From: Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection

Scaffold ID #SNPs w/quality > 100 #SNPs w/quality > 200 Scaffold length (nt) Scaffold length (nt)/SNP > 100 Scaffold length (nt)/SNP > 200
scaffold 1 1267 716 46,877,626 36,999 65,472
scaffold 2 1205 412 26,807,724 22,247 65,067
scaffold 3 499 241 22,025,550 44,140 91,392
scaffold 4 412 227 30,528,727 74,099 134,488
scaffold 5 698 357 18,502,877 26,508 51,829
scaffold 6 392 217 28,902,582 73,731 133,192
scaffold 7 862 414 22,790,193 26,39 55,049
scaffold 8 1266 459 21,829,753 17,43 47,559
scaffold 9 9 4 2,126,789 236,310 531,697
scaffold 10 0 0 851,981 na na
scaffold 11 1 8 736,058 736,058 92,007
scaffold 12 27 8 675,284 25,011 84,411
scaffold 13 0 0 670,721 na na
scaffold 14 1 0 575,512 575,512 na
scaffold 15 14 8 516,056 3861 64,507
scaffold 16 1 1 390,024 390,024 390,024
scaffold 17 0 0 370,749 na na
scaffold 18 0 0 333,953 na na
scaffold 22 0 0 167,479 na na
scaffold 23 0 0 69,963 na na
Total 6654 3065 225,749,601 ave. = 40,176 ave. = 80,506