Table 3 Statistics of potato WGP sequence tags
From: A hybrid BAC physical map of potato: a framework for sequencing a heterozygous genome
| Â | BAC library | Â | |
|---|---|---|---|
| Â | RHPOTKEY | RHPOTLUC | TOTAL |
Library type | partial digest | sheared | Â |
Estimated average clone size (kb) | 130 | 90 | Â |
BACs analysed | 55296 | 30720 | 86016 |
Genome equivalents analysed * | 8.5 | 3.3 | 11.7 |
BACs per sequence run (# runs) | 13824 (4) | 15360 (2) | Â |
Number of BACs with WGP tags | 44810 | 21735 | 66545 |
% BACs with WGP tags (st. dev.) ** | 91.3 (3.6) | 71.1 (4.5) | Â |
Average number of tags/BAC | 38 | 26 | 34 |
Average number of reads/tag | 63 | 65 | 57 |
Unique WGP tag sequences (26 bp) | Â | Â | 322437 |