| |
S. mansoni
|
S.mediterranea
|
|---|
|
Family
|
HMM
|
MC
|
H
|
Final
|
HMM
|
R
|
MC
|
H
|
R
|
Final
|
|---|
|
G
|
2
|
2
|
3
|
2
|
6
|
6
|
6
|
10
|
9
|
9
|
|
R
|
77
|
74
|
105
|
105
|
270
|
256
|
-
|
291
|
418
|
418
|
|
AS
|
4
|
4
|
5
|
5
|
11
|
11
|
11
|
30
|
24
|
22
|
|
F
|
5
|
4
|
5
|
5
|
10
|
8
|
8
|
11
|
10
|
11
|
- Sequence counts are provided for each GPCR family at different stages in the receptor mining protocol. The S. mansoni count is shown after application of the TM-focused HMM and filtering of the predicted proteome (HMM), extensive manual curation (MC), homology-based searches against the nucleotide assembly (H) and a final round of manual curation (Final). This progression is similarly displayed for S. mediterranea, with additional stages for the shedding of redundant sequences using BLAT (R).
