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Table 1 Tabulated GPCR sequence count at various stages of processing

From: The repertoire of G protein-coupled receptors in the human parasite Schistosoma mansoni and the model organism Schmidtea mediterranea

  S. mansoni S.mediterranea
Family HMM MC H Final HMM R MC H R Final
G 2 2 3 2 6 6 6 10 9 9
R 77 74 105 105 270 256 - 291 418 418
AS 4 4 5 5 11 11 11 30 24 22
F 5 4 5 5 10 8 8 11 10 11
  1. Sequence counts are provided for each GPCR family at different stages in the receptor mining protocol. The S. mansoni count is shown after application of the TM-focused HMM and filtering of the predicted proteome (HMM), extensive manual curation (MC), homology-based searches against the nucleotide assembly (H) and a final round of manual curation (Final). This progression is similarly displayed for S. mediterranea, with additional stages for the shedding of redundant sequences using BLAT (R).