Top piRNA clusters Brennecke et al. (2007)
| |
piRNA clusters from present study
| |
---|
Cluster id 1
|
Chr.
|
start
|
stop
|
Cluster Unique piRNAs 2
|
Cluster id 1
|
Chr.
|
start
|
stop
|
Cluster Unique piRNAs 2
|
---|
1
|
2R
|
2144349
|
2386719
|
1686
|
1
|
2R
|
2110440
|
2217150
|
2350
|
| | | | |
2
|
2R
|
2304581
|
2394124
|
1975
|
2
|
X
|
21392175
|
21431907
|
986
|
24
|
X
|
21390160
|
21406447
|
231
|
| | | | |
37
|
X
|
21424709
|
21429775
|
194
|
3
|
4
|
1258473
|
1348320
|
684
|
27
|
4
|
1250143
|
1289828
|
217
|
5
|
2L
|
20148259
|
20227581
|
482
|
22
|
2L
|
20136345
|
20153079
|
235
|
| | | | |
14
|
2L
|
20164387
|
20176739
|
333
|
| | | | |
12
|
2L
|
20198129
|
20230518
|
392
|
6
|
3L
|
23273964
|
23314199
|
228
|
9
|
3L
|
23251131
|
23313773
|
520
|
7
|
U
|
4015849
|
4029971
|
176
|
7
|
U
|
4022887
|
4029272
|
834
|
8
|
X
|
21505666
|
21684449
|
170
|
4
|
X
|
21496075
|
21510974
|
1046
|
| | | | |
8
|
X
|
21526569
|
21543427
|
520
|
| | | | |
33
|
X
|
21631078
|
21672693
|
206
|
| | | | |
69
|
X
|
21604048
|
21622362
|
123
|
9
|
X
|
21759393
|
21844063
|
155
|
53
|
X
|
21786358
|
21878191
|
150
|
10
|
U
|
5766708
|
5772171
|
133
|
1246
|
U
|
5760625
|
5774759
|
6
|
11
|
3R
|
27895169
|
27905030
|
107
|
N/A 3
|
3R
|
N/A
|
N/A
|
N/A
|
12
|
3LHet
|
1402377
|
1557939
|
102
|
148
|
3LHet
|
1438260
|
1446518
|
55
|
| | | | |
99
|
3LHet
|
1485097
|
1535498
|
84
|
| | | | |
163
|
3LHet
|
1557765
|
1579687
|
50
|
13
|
3LHet
|
2011004
|
2180268
|
86
|
75
|
3LHet
|
2068714
|
2118742
|
110
|
| | | | |
133
|
3LHet
|
2126549
|
2158540
|
62
|
| | | | |
3480
|
3LHet
|
2167493
|
2167493
|
1
|
14
|
U
|
7542733
|
7545114
|
84
|
236
|
U
|
7532042
|
7545038
|
33
|
15
|
3LHet
|
238123
|
332969
|
71
|
N/A
|
3LHet
|
N/A
|
N/A
|
N/A
|
- 1Clusters were ordered and numbered according to the abundance of cluster unique piRNAs in both studies. Cluster 6 from Brennecke et al. (2007) was not reported here because it was not located on an assembled portion of the published D. melanogaster BGDP 5 genome.
- 2"Cluster unique piRNAs" were defined as piRNA sequences that mapped in only one location in the genome and inside a cluster.
- 3"N/A" indicates the absence of any overlapping piRNA cluster in present study.