Table 7 The top 30 Ae. aegypti genes with highest piRNA density
Gene | Gene length (bps.) | Unique mapping piRNAs1 | piRNA density (piRNAs/gene bps.) | strand percent +/- | gene inside piRNA cluster | Function of best match (if available) and species | Best match database | Best match accession |
|---|---|---|---|---|---|---|---|---|
AAEL011224 | 303 | 16488 | 54.6 | 100/0 | yes | hypothetical protein | VectorBase | AAEL011224 |
AAEL007866 | 1334 | 10651 | 8.0 | 99/1 | yes | putative NS1 protein, Aedes flavivirus | NR | YP_003084126 |
AAEL007861 | 1182 | 4356 | 3.7 | 100/0 | yes | uncharacterized transmembrane protein DDB_G0289901, Dictyostelium discoideum | Swiss-Prot | Y8625_DICDI |
AAEL010454 | 1425 | 4084 | 2.9 | 90/10 | yes | hypothetical protein | VectorBase | AAEL010454 |
AAEL000120 | 1020 | 1432 | 1.4 | 94/6 | no | nucleoprotein N, bovine ephemeral fever virus | Swiss-Prot | NCAP_BEFV |
AAEL009005 | 629 | 856 | 1.4 | 100/0 | no | adult cuticle protein, Aedes aegypti | VectorBase | AAEL009005 |
AAEL005277 | 4038 | 4891 | 1.2 | 100/0 | yes | Zinc finger protein on ecdysone puffs, Drosophila melanogaster | Swiss-Prot | PEP_DROME |
AAEL009525 | 1236 | 1494 | 1.2 | 100/0 | no | nucleoprotein putative, Aedes aegypti | VectorBase | AAEL009525 |
AAEL005213 | 1377 | 1582 | 1.1 | 100/0 | no | hypothetical protein | VectorBase | AAEL005213 |
AAEL000668 | 1333 | 1522 | 1.1 | 100/0 | no | conserved hypothetical protein | VectorBase | AAEL000668 |
AAEL001004 | 6251 | 7009 | 1.1 | 100/0 | no | protein maelstrom homolog, Aedes aegypti | Swiss-Prot | MAEL_AEDAE |
AAEL007686 | 2253 | 2439 | 1.1 | 100/0 | no | Transcription factor MafB, Coturnix coturnix jopnica | Swiss-Prot | MAFB_COTJA |
AAEL001772 | 2562 | 2643 | 1.0 | 100/0 | no | RNA-dependent RNA polymerase, Nyamanini virus | NR | YP_002905337 |
AAEL005456 | 966 | 841 | 0.9 | 100/0 | yes | nucleoprotein putative, Aedes aegypti | VectorBase | AAEL005456 |
AAEL000808 | 978 | 811 | 0.8 | 100/0 | yes | nucleoprotein putative, Aedes aegypti | VectorBase | AAEL000808 |
AAEL013013 | 1088 | 862 | 0.8 | 100/0 | no | hypothetical protein | VectorBase | AAEL013013 |
AAEL006843 | 21911 | 17268 | 0.8 | 100/0 | no | NEDD4-binding protein 2, Homo sapiens | Swiss-Prot | N4BP2_HUMAN |
AAEL006159 | 330 | 247 | 0.8 | 100/0 | yes | Peritrophin-1, Anopheles gambiae | Swiss-Prot | PE1_ANOGA |
AAEL005225 | 762 | 570 | 0.7 | 100/0 | no | conserved hypothetical protein | VectorBase | AAEL005225 |
AAEL004959 | 1242 | 914 | 0.7 | 100/0 | no | nucleoprotein putative, Aedes aegypti | VectorBase | AAEL004959 |
AAEL009873 | 1602 | 1142 | 0.7 | 78/22 | no | nucleoprotein, bovine ephemeral fever virus | Swiss-Prot | NCAP_BEFV |
AAEL005768 | 738 | 511 | 0.7 | 100/0 | no | hypothetical protein | VectorBase | AAEL005768 |
AAEL007499 | 579 | 372 | 0.6 | 100/0 | no | hypothetical protein | VectorBase | AAEL007499 |
AAEL007844 | 2572 | 1490 | 0.6 | 100/0 | no | glycoprotein, spring viremia of carp virus | NR | ABB13496 |
AAEL010887 | 60098 | 34174 | 0.6 | 100/0 | no | Myosin heavy chain IB, Acanthamoeba castellanii | Swiss-Prot | MYSB_ACACA |
AAEL000673 | 1461 | 753 | 0.5 | 100/0 | no | arbohydrate kinase domain-containing protein, Mus musculus | Swiss-Prot | CARKD_MOUSE |
AAEL000276 | 71446 | 36638 | 0.5 | 1/99 | no | VPRBP protein, Culex quinquefasciatus | NR | XP_001865214 |
AAEL012346 | 1177 | 598 | 0.5 | 100/0 | no | hypothetical protein | VectorBase | AAEL012346 |
AAEL006704 | 1356 | 684 | 0.5 | 100/0 | no | fibrinogen and fibronectin, Aedes aegypti | VectorBase | AAEL006704 |
AAEL003715 | 615 | 298 | 0.5 | 100/0 | no | hypothetical protein | VectorBase | AAEL003715 |