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Table 7 The top 30 Ae. aegypti genes with highest piRNA density

From: The mosquito Aedes aegypti has a large genome size and high transposable element load but contains a low proportion of transposon-specific piRNAs

Gene Gene length (bps.) Unique mapping piRNAs1 piRNA density (piRNAs/gene bps.) strand percent +/- gene inside piRNA cluster Function of best match (if available) and species Best match database Best match accession
AAEL011224 303 16488 54.6 100/0 yes hypothetical protein VectorBase AAEL011224
AAEL007866 1334 10651 8.0 99/1 yes putative NS1 protein, Aedes flavivirus NR YP_003084126
AAEL007861 1182 4356 3.7 100/0 yes uncharacterized transmembrane protein DDB_G0289901, Dictyostelium discoideum Swiss-Prot Y8625_DICDI
AAEL010454 1425 4084 2.9 90/10 yes hypothetical protein VectorBase AAEL010454
AAEL000120 1020 1432 1.4 94/6 no nucleoprotein N, bovine ephemeral fever virus Swiss-Prot NCAP_BEFV
AAEL009005 629 856 1.4 100/0 no adult cuticle protein, Aedes aegypti VectorBase AAEL009005
AAEL005277 4038 4891 1.2 100/0 yes Zinc finger protein on ecdysone puffs, Drosophila melanogaster Swiss-Prot PEP_DROME
AAEL009525 1236 1494 1.2 100/0 no nucleoprotein putative, Aedes aegypti VectorBase AAEL009525
AAEL005213 1377 1582 1.1 100/0 no hypothetical protein VectorBase AAEL005213
AAEL000668 1333 1522 1.1 100/0 no conserved hypothetical protein VectorBase AAEL000668
AAEL001004 6251 7009 1.1 100/0 no protein maelstrom homolog, Aedes aegypti Swiss-Prot MAEL_AEDAE
AAEL007686 2253 2439 1.1 100/0 no Transcription factor MafB, Coturnix coturnix jopnica Swiss-Prot MAFB_COTJA
AAEL001772 2562 2643 1.0 100/0 no RNA-dependent RNA polymerase, Nyamanini virus NR YP_002905337
AAEL005456 966 841 0.9 100/0 yes nucleoprotein putative, Aedes aegypti VectorBase AAEL005456
AAEL000808 978 811 0.8 100/0 yes nucleoprotein putative, Aedes aegypti VectorBase AAEL000808
AAEL013013 1088 862 0.8 100/0 no hypothetical protein VectorBase AAEL013013
AAEL006843 21911 17268 0.8 100/0 no NEDD4-binding protein 2, Homo sapiens Swiss-Prot N4BP2_HUMAN
AAEL006159 330 247 0.8 100/0 yes Peritrophin-1, Anopheles gambiae Swiss-Prot PE1_ANOGA
AAEL005225 762 570 0.7 100/0 no conserved hypothetical protein VectorBase AAEL005225
AAEL004959 1242 914 0.7 100/0 no nucleoprotein putative, Aedes aegypti VectorBase AAEL004959
AAEL009873 1602 1142 0.7 78/22 no nucleoprotein, bovine ephemeral fever virus Swiss-Prot NCAP_BEFV
AAEL005768 738 511 0.7 100/0 no hypothetical protein VectorBase AAEL005768
AAEL007499 579 372 0.6 100/0 no hypothetical protein VectorBase AAEL007499
AAEL007844 2572 1490 0.6 100/0 no glycoprotein, spring viremia of carp virus NR ABB13496
AAEL010887 60098 34174 0.6 100/0 no Myosin heavy chain IB, Acanthamoeba castellanii Swiss-Prot MYSB_ACACA
AAEL000673 1461 753 0.5 100/0 no arbohydrate kinase domain-containing protein, Mus musculus Swiss-Prot CARKD_MOUSE
AAEL000276 71446 36638 0.5 1/99 no VPRBP protein, Culex quinquefasciatus NR XP_001865214
AAEL012346 1177 598 0.5 100/0 no hypothetical protein VectorBase AAEL012346
AAEL006704 1356 684 0.5 100/0 no fibrinogen and fibronectin, Aedes aegypti VectorBase AAEL006704
AAEL003715 615 298 0.5 100/0 no hypothetical protein VectorBase AAEL003715