Table 2 O. fasciatus transcriptome assembly statistics.
From: The maternal and early embryonic transcriptome of the milkweed bug Oncopeltus fasciatus
| Â | Full Assembly | Normalized Assembly | Non-Normalized Assembly |
|---|---|---|---|
Assembled reads (base pairs) | 1,773,450 (508,738,047) | 389,605 (84,353,140) | 336,568 (108,372,883) |
Isogroups ("genes") | 16,617 | 10,581 | 7,591 |
Isotigs ("transcripts") | 21,097 | 11,353 | 8,346 |
Isotig N50 | 1,735 | 846 | 1,162 |
Mean # isotigs per isogroup | 1.3 | 1.1 | 1.1 |
Contigs ("exons") | 22,235 | 11,839 | 8,731 |
Mean # contigs per isotig | 1.9 | 1.2 | 1.3 |
Singletons (singletons after secondary CAP3 assembly) | 178,770 (112,531) | 110,265 (N/A) | 52,585 (N/A) |