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Table 2 Total Peptide Spectra with Viral Assignment

From: Coupled transcriptome and proteome analysis of human lymphotropic tumor viruses: insights on the detection and discovery of viral genes

Peptide Spectra: Total Viral   Annot. Unannot.
BCBL-1       
Latent 103113 KSHV 754 0.731% = 751 (55) 3 (2)
Lytic 75435 KSHV 1135 1.505% = 1131 (58) 4 (1)
BC-1       
Latent 82992 KSHV 64 0.077% = 57 (19) 7 (3)
   EBV 29 0.035% = 21 (12) 8 (4)
Lytic 85409 KSHV 537 0.629% = 530 (41) 7 (2)
   EBV 230 0.269% = 217 (39) 13 (3)
  1. Total spectra for all observed peptides are reported in bold.
  2. The percentage of viral peptide spectra from the total number of observed spectra is indicated in italics.
  3. The total number of viral proteins detected is indicated in parentheses.
  4. Total possible KSHV proteins = 85 known; 3 novel
  5. Total possible EBV proteins = 83 known; 4 unannotated/novel
  6. Annot. = Annotated; Unannot. = Unannotated