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Table 2 Keyword Search of Functional Annotation.

From: Generation of a reference transcriptome for evaluating rainbow trout responses to various stressors

Search Term

BLASTx Hit Description

Gene Ontology Term

chloride

903

524

salinity

0

33

salt

49

127

water

0

200

oxygen

1210

827

carbon dioxide

0

8

ammonia

26

44

nitrate

19

10

lactate

90

34

cortisol

0

11

glucose

1221

1052

lysozyme

49

15

stress

304

1465

heat shock

759

191

temperature

31

67

apoptotic

89

157

apoptosis

821

3698

  1. Searching BLASTx Hit Descriptions and Gene Ontology Terms associated with isotigs from the reference transcriptome reveals significant representation of transcripts expected to be involved in stress responses.
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BMC Genomics

ISSN: 1471-2164

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