Using RNA-seq to determine the transcriptional landscape and the hypoxic response of the pathogenic yeast Candida parapsilosis

Table 2 Comparison of protein-coding predictions in the cpar and cpag annotations to the Cpar2 annotation

	cpar¹	cpag²
Number of gene models in original set (all single-exon)	5822	5733
Unmodified in Cpar2	5195	4486
Modified in Cpar2 ³	442	929
Removed in Cpar2	185	318
Additional gene models in Cpar2 ³	173	395

¹Annotation from Rossignol et al [18]
²Annotation from Butler et al [15]
³New and modified ORFs include the identification of 422 introns in 387 genes, listed in Additional file 4.

ISSN: 1471-2164