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Table 5 Summary of repetitive elements in the assembled region of catfish genome.

From: A pilot study for channel catfish whole genome sequencing and de novo assembly

 

Transposable elements

Tandom repeats

Total

 

DNA transposons

Retroelements

Satellites

Simple repeats

Low complexity repeats

 
  

SINEs

LINEs

LTRs

    

Length (bp)

86,175

6,527

9,040

12,485

1,193

17,223

7,955

 

% of sequences

8.38%

0.63%

0.88%

1.21%

0.12%

1.67%

0.77%

13.66%