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Table 1 Disambiguated INV and MDP inconsistencies

From: Refinement of Bos taurus sequence assembly based on BAC-FISH experiments

Code

Test

Supported draft

INV_1_24

FISH/int

UMD (85%)

INV_1_53.3

FISH/int

UMD (94%)

INV_4_7.2

FISH/int

UMD (90%)

INV_7_103.2

FISH/int

UMD (96%)

INV_10_59.3

FISH/int

UMD (95%)

INV_14_32

FISH/int

UMD (73%)

INV_20_0

FISH/int

UMD (98%)

INV_23_0

FISH/met.

UMD

INV_26_18.8

FISH/int

UMD (75%)

INV_27_42.3

FISH/int

UMD (90%)

MDP_4_16.2

FISH/int

Btau (98%)

MDP_5_9.6

FISH/met.

UMD

MDP_7_7.6

PCR

UMD

MDP_7_43.1

PCR

-

MDP_28_0.7

PCR

UMD

DCM_2-11

FISH/met

UMD

DCM_3-13

FISH/met

Btau

DCM_3-2

FISH/met

UMD

DCM_3-22

FISH/met

UMD

DCM_7-X

FISH/met

UMD

DCM_10-1

FISH/met

UMD

DCM_10-4

FISH/met

UMD

DCM_15-X

FISH/met

UMD

DCM_27-21

FISH/met

Btau

  1. INV, MDP, or DCM inconsistencies (first column) disambiguated using the method reported in the second column: FISH on interphase nuclei (FISH/int), FISH on metaphases (FISH/met), or PCR. The third column indicates the draft [UMD, Btau, or neither of them (-)] which is in agreement with the experimental results. In the case of FISH performed in interphase nuclei, the round bracket reports the percentage in which the pattern of signals support the draft reported on the left of the brackets. In all cases p(H0) was < 0.0004%.