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Table 2 454 Sequencing data from cDNA libraries of four oat genotypes

From: Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology

Genotype Total reads Assembled reads # contigs Total contig length (Mb) Mean contig length (bp) length SD (bp) Minimum contig size (bp) Maximum contig size (bp) Average coverage (x)
Ogle1040 283,478 231,057 32,245 18.09 561 205 41 2217 4.1
TAM O-301 381,397 307,751 42,147 24.70 586 217 40 4303 4.0
Gem 180,447 137,743 23,681 14.20 598 238 43 4229 3.1
HiFi 235,589 188,015 29,036 16.40 564 220 42 4416 3.6
Total 1,080,911 864,566 127,109