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Table 3 Difference between closely related gene segments

From: Segmental duplication as one of the driving forces underlying the diversity of the human immunoglobulin heavy chain variable gene region

Difference

Name

Length

Name

Length

Difference

     

bp

%

 

GRCh37

 

HuRef

   
 

4-28.1P

253

4-28.2P

255

2

0.78

 

3-29P

458

3-29.1P

458

6

1.31

Allelic

3-30

454

3-30.1

454

1

0.22

 

4-31

438

4-28.1a

438

19

4.34

 

4-31

438

4-31.1

438

8

1.83

 

3-33

454

3-33.1 (partial)

202

3

1.49

 

Total

  

2245

39

1.74

 

Repeat I

 

Repeat II

   
 

4-28

435

4-31

438

29

6.62

 

4-28.1P

253

4-31.1P

255

12

4.71

 

3-29P

458

3-32P

458

13

2.84

Paralogous in GRCh37

3-30

454

3-33

454

4

0.88

 

4-30.1P

274

4-33.1

274

5

1.82

 

3-30.2P

449

3-33.2P

449

8

1.78

 

Repeat I

 

Repeat III

   
 

4-28

438

4-34

433

41

9.36

 

Repeat II

 

Repeat III

   
 

4-31

438

4-34

433

43

9.82

 

Repeat I

 

Repeat I

   
 

4-28

435

4-28.1a

438

28

6.39

 

Repeat I

 

Repeat II

   
 

4-28

435

4-31.1

438

15

3.42

Paralogous in HuRef

4-28.1a

438

4-31.1

438

17

3.88

 

3-30.1

454

3-33.1 (partial)

202

3

1.49

 

Repeat I

 

Repeat III

   
 

4-28.1a

438

4-34

433

43

9.93

 

Repeat II

 

Repeat III

   
 

4-31.1

438

4-34

433

41

9.47