Table 3 Soybean gene models and their Arabidopsis annotations within a syntenic region near the 1_0804 locus
Soybean Chromosome | Soybean gene model | Homologous cowpea locus | E-score | Arabidopsis annotation |
|---|---|---|---|---|
Gm11 | Glyma11g35090.1 | - | 1.00E-174 | CHR2V8|COORD:16735456..16738238| similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G09000.1) |
Gm11 | Glyma11g35100.1 | - | 1.00E-176 | CHR5V8|COORD:1712951..1715640| ATE1 (DELAYED LEAF SENESCENCE 1); arginyltransferase |
Gm11 | Glyma11g35110.2 | - | 1.00E-59 | CHR2V8|COORD:16755237..16756435| yippee family protein |
Gm11 | Glyma11g35110.1 | - | 1.00E-59 | CHR2V8|COORD:16755237..16756435| yippee family protein |
Gm11 | Glyma11g35120.1 | - | - | - |
Gm11 | Glyma11g35130.1 | 1_0804 | 1.00E-111 | CHR2V8|COORD:16752962..16754268| LHCB4.3 (LIGHT HARVESTING COMPLEX PSII); chlorophyll binding |
Gm11 | Glyma11g35140.1 | - | 4.00E-24 | CHR4V8|COORD:16426775..16427836| TAF8 (TBP-ASSOCIATED FACTOR 8); DNA binding |
Gm11 | Glyma11g35150.1 | - | - | - |
Gm11 | Glyma11g35160.1 | - | - | - |
Gm11 | Glyma11g35170.1 | - | 3.00E-67 | CHR2V8|COORD:16750185..16751533| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55880.2) |
Gm11 | Glyma11g35180.1 | - | - | - |
Gm11 | Glyma11g35190.1 | - | - | - |
Gm11 | Glyma11g35200.1 | - | - | - |
Gm11 | Glyma11g35210.1 | - | 1.00E-149 | CHR2V8|COORD:5685088..5687703| ATCHX15 (cation/hydrogen exchanger 15); monovalent cation:proton antiporter |
Gm11 | Glyma11g35220.1 | - | 6.00E-11 | CHR3V8|COORD:19436813..19438010| SYP122 (syntaxin 122); SNAP receptor |
Gm11 | Glyma11g35230.1 | - | 2.00E-11 | CHR1V8|COORD:9715602..9720333| RNA helicase, putative |
Gm11 | Glyma11g35240.1 | - | 1.00E-113 | CHR3V8|COORD:3511107..3512905| GDSL-motif lipase/hydrolase family protein |
Gm11 | Glyma11g35240.2 | - | 1.00E-113 | CHR3V8|COORD:3511107..3512905| GDSL-motif lipase/hydrolase family protein |
Gm11 | Glyma11g35250.1 | - | 1.00E-10 | CHR1V8|COORD:6781665..6782015| LCR78/PDF1.4 (Low-molecular-weight cysteine-rich 78) |
Gm11 | Glyma11g35260.2 | - | 7.00E-71 | CHR1V8|COORD:6585078..6586299| TTN10 (TITAN 10) |
Gm11 | Glyma11g35260.1 | - | 7.00E-71 | CHR1V8|COORD:6585078..6586299| TTN10 (TITAN 10) |
Gm11 | Glyma11g35270.1 | - | 7.00E-28 | CHR2V8|COORD:16741623..16741958| ELF4 (EARLY FLOWERING 4) |