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Table 3 Soybean gene models and their Arabidopsis annotations within a syntenic region near the 1_0804 locus

From: Genic SNP markers and legume synteny reveal candidate genes underlying QTL for Macrophomina phaseolina resistance and maturity in cowpea [Vigna unguiculata (L) Walp.]

Soybean Chromosome Soybean gene model Homologous cowpea locus E-score Arabidopsis annotation
Gm11 Glyma11g35090.1 - 1.00E-174 CHR2V8|COORD:16735456..16738238| similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT3G09000.1)
Gm11 Glyma11g35100.1 - 1.00E-176 CHR5V8|COORD:1712951..1715640| ATE1 (DELAYED LEAF SENESCENCE 1); arginyltransferase
Gm11 Glyma11g35110.2 - 1.00E-59 CHR2V8|COORD:16755237..16756435| yippee family protein
Gm11 Glyma11g35110.1 - 1.00E-59 CHR2V8|COORD:16755237..16756435| yippee family protein
Gm11 Glyma11g35120.1 - - -
Gm11 Glyma11g35130.1 1_0804 1.00E-111 CHR2V8|COORD:16752962..16754268| LHCB4.3 (LIGHT HARVESTING COMPLEX PSII); chlorophyll binding
Gm11 Glyma11g35140.1 - 4.00E-24 CHR4V8|COORD:16426775..16427836| TAF8 (TBP-ASSOCIATED FACTOR 8); DNA binding
Gm11 Glyma11g35150.1 - - -
Gm11 Glyma11g35160.1 - - -
Gm11 Glyma11g35170.1 - 3.00E-67 CHR2V8|COORD:16750185..16751533| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G55880.2)
Gm11 Glyma11g35180.1 - - -
Gm11 Glyma11g35190.1 - - -
Gm11 Glyma11g35200.1 - - -
Gm11 Glyma11g35210.1 - 1.00E-149 CHR2V8|COORD:5685088..5687703| ATCHX15 (cation/hydrogen exchanger 15); monovalent cation:proton antiporter
Gm11 Glyma11g35220.1 - 6.00E-11 CHR3V8|COORD:19436813..19438010| SYP122 (syntaxin 122); SNAP receptor
Gm11 Glyma11g35230.1 - 2.00E-11 CHR1V8|COORD:9715602..9720333| RNA helicase, putative
Gm11 Glyma11g35240.1 - 1.00E-113 CHR3V8|COORD:3511107..3512905| GDSL-motif lipase/hydrolase family protein
Gm11 Glyma11g35240.2 - 1.00E-113 CHR3V8|COORD:3511107..3512905| GDSL-motif lipase/hydrolase family protein
Gm11 Glyma11g35250.1 - 1.00E-10 CHR1V8|COORD:6781665..6782015| LCR78/PDF1.4 (Low-molecular-weight cysteine-rich 78)
Gm11 Glyma11g35260.2 - 7.00E-71 CHR1V8|COORD:6585078..6586299| TTN10 (TITAN 10)
Gm11 Glyma11g35260.1 - 7.00E-71 CHR1V8|COORD:6585078..6586299| TTN10 (TITAN 10)
Gm11 Glyma11g35270.1 - 7.00E-28 CHR2V8|COORD:16741623..16741958| ELF4 (EARLY FLOWERING 4)