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Table 3 Conservation of the identified sRNAs in closely related species

From: Identification and functional characterization of small non-coding RNAs in Xanthomonas oryzae pathovar oryzae

species

Xooc

 

Xcc

 

Xoo

Xcv

Xac

 

Xf

strain

BLS256

8004

ATCC33913

B100

KACC10331

MAFF311018

85-10

306

9a5c

Temecule1

sRNA-Xoo 1

N

91%

91%

91%

100%

100%

95%

95%

N

N

sRNA-Xoo 2

95%

N

N

N

100%

100%

N

N

N

N

sRNA-Xoo 3

98%

94%

94%

94%

100%

100%

96%

95%

N

N

sRNA-Xoo 4

95%

92%

92%

92%

100%

100%

93%

93%

N

N

sRNA-Xoo 5

99%

94%

94%

94%

99%

100%

99%

98%

N

N

sRNA-Xoo 6

96%

92%

92%

92%

100%

99%

94%

94%

N

N

sRNA-Xoo 7

99%

N

N

N

100%

99%

N

N

N

N

sRNA-Xoo 8

97%

84%

84%

84%

100%

100%

88%

89%

N

N

  1. Xooc: Xanthomonas oryzae pv oryzicola; Xcc: Xanthomonas campestris pv. campestris; Xoo: Xanthomonas oryzae pv. oryzae; Xcv: Xanthomonas campestris pv. vesicatoria; Xac: Xanthomonas axonopodis pv. citri; Xf: Xylella fastidiosa; N: no similar sequence