Independent component and pathway-based analysis of miRNA-regulated gene expression in a model of type 1 diabetes

BMC Genomics

Table 1 Target prediction using negative correlation or ICA (loads)

miRNA	# 6mer matches	Correlation (q-value)	Load (q-value)
miR-124	2215	0.0027	0.005
miR-128	2105	0.63	0.07
miR-192	1128	0.63	0.0007
miR-194	1110	0.0016	0.02
miR-204	1560	0.63	0.02
miR-375	1128	0.0027	0.04
miR-672	1060	0.87	0.5
miR-708	1675	0.023	0.0007

The table shows the number of 6mer seed matches in the array data for each of the eight miRNAs (2^nd column), the q-values (corrected p-values) for negative correlation (3^rd column) or load values (4^th column). The q-values in the 4^th column are the lowest q-value found among the five significant ICs.

ISSN: 1471-2164