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Table 1 Number of components used in PARAFAC and Tucker3 models.

From: Sublineage structure analysis of Mycobacterium tuberculosis complex strains using multiple-biomarker tensors

  

PARAFAC

Tucker3

  

# Components

Core Consistency / Variance

# Components

Variance

M. africanum

64 × 22 × 12

3

95.08 / 93.33

[4 3 1]

91.94

M. bovis

102 × 34 × 12

2

100.00 / 86.02

[7 5 1]

91.05

East Asian (Beijing)

571 × 5 × 12

2

100.00 / 81.58

[3 4 2]

93.09

East-African Indian (CAS)

508 × 18 × 12

3

90.75 / 80.48

[6 6 4]

94.27

Indo-Oceanic

1023 × 28 × 12

5

92.99 / 80.35

[15 13 5]

95.55

Euro-American

4580 × 109 × 12

14

99.06 / 89.83

[14 13 5]

89.77

  1. Number of components used in PARAFAC and Tucker3 models to fit the tensors for the datasets to be clustered. We used the core consistency diagnostic to validate PARAFAC models and percentage of explained variance to validate Tucker3 models.
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BMC Genomics

ISSN: 1471-2164

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