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Table 4 Running time comparison of different tools

From: Accurate and fast estimation of taxonomic profiles from metagenomic shotgun sequences

Dataset CPU hours
  MetaPhyler PhymmBL MEGAN WebCarma
70K reads 8 hours 4 days 34 days 24 hours
  1. On a single 2.4GHz processor, the computation time (CPU hours) used by MetaPhyler, PhymmBL and MEGAN for analyzing 70K 300bp simulated sequences. CPU hours for WebCarma are calculated using its web server.