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Table 8 Statistics of multigene start sites after the closure procedure for the E. coli case study. E. coli, multigene start sites statistics Multigene start sites statistics after the closure procedure.

From: CAMBer: an approach to support comparative analysis of multiple bacterial strains

 

# of multigenes with

 

9 elt.

8 elt.

7 elt.

6 elt.

5 elt.

4 elt.

3 elt.

2 elt.

1 elt.

total

O26-H11-11368

7

7

4

20

57

213

631

1793

4310

7042

O157-H7-EC4115

13

13

7

14

62

157

624

1857

4226

6973

O157-H7-EDL933

10

13

5

18

46

143

617

1831

4242

6925

O157-H7-TW14359

14

12

7

13

58

151

616

1836

4195

6902

O157-H7-Sakai

14

8

5

16

49

152

600

1826

4198

6868

O103-H2-12009

0

28

3

16

53

162

583

1704

4078

6627

O55-H7-CB9615

0

4

10

12

44

156

564

1722

3950

6462

O111-H-11128

35

7

1

18

54

154

565

1686

3970

6490

042

0

2

2

11

28

138

538

1598

3791

6108

CFT073

6

2

4

8

33

161

534

1721

3836

6305

ED1a

1

4

0

11

24

144

524

1577

3957

6242

UMN026

0

3

7

9

29

139

539

1556

3719

6001

55989

0

2

3

11

37

146

559

1605

3766

6129

ETECH10407

1

3

2

11

36

143

549

1589

3809

6143

IAI39

22

5

2

4

43

149

508

1619

3566

5918

ABU83972

0

3

3

7

29

140

530

1662

3736

6110

IHE3034

0

1

2

9

32

144

563

1644

3712

6107

APECO1

0

1

2

12

29

145

542

1675

3705

6111

SMS-3-5

3

0

5

8

24

116

500

1515

3586

5757

UTI89

1

1

2

9

30

147

561

1655

3658

6064

S88

0

2

3

9

33

149

550

1658

3678

6082

UM146

1

1

1

8

28

137

528

1590

3640

5934

E24377A

0

1

2

6

31

125

516

1502

3656

5839

O127-H6-E234869

0

3

2

8

15

169

471

1474

3618

5760

536

1

0

2

8

21

135

510

1560

3546

5783

W

0

1

2

6

27

112

483

1492

3636

5759

SE11

0

3

0

9

32

119

505

1467

3625

5760

O83-H1-NRG857C

0

1

2

7

23

117

489

1503

3427

5569

ATCC8739

0

1

3

6

26

106

491

1431

3468

5532

SE15

0

1

1

10

22

111

467

1445

3366

5423

IAI1

0

1

1

5

29

121

484

1442

3428

5511

K12-DH10B

0

3

1

6

23

98

457

1475

3504

5567

K12-W3110

0

3

1

6

25

100

458

1467

3471

5531

HS

0

0

1

7

24

121

480

1439

3429

5501

K12-MG1655

0

3

1

6

25

97

463

1455

3473

5523

DH1

0

3

1

6

25

97

458

1453

3447

5490

B-REL606

0

3

2

5

24

99

511

1472

3389

5505

BW2952

0

3

1

7

25

97

453

1447

3421

5454

BL21-Gold-DE3

0

2

1

5

25

98

497

1460

3388

5476

BL21-DE3

0

2

1

5

25

100

497

1461

3362

5453

BL21-DE3-BL21

0

2

1

5

25

100

497

1461

3370

5461